We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
37.5
nTPM
Monaco:
416.6
nTPM
Schmiedel:
6.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.5
HPA sample
nTPM
gdT-cell nTPM: 22.5
Samples: 6
Max nTPM: 36.6
Min nTPM: 8.4
P10809_1007
28.1
P10809_1022
30.3
P10809_1041
14.8
P10809_1060
16.5
P10809_1077
8.4
P10809_1098
36.6
MAIT T-cell nTPM: 37.5
Samples: 6
Max nTPM: 60.2
Min nTPM: 19.9
P10809_1006
60.2
P10809_1024
29.3
P10809_1043
35.4
P10809_1062
46.4
P10809_1083
33.6
P10809_1097
19.9
Memory CD4 T-cell nTPM: 1.1
Samples: 6
Max nTPM: 2.1
Min nTPM: 0.0
P10809_1014
1.9
P10809_1026
0.0
P10809_1045
0.5
P10809_1064
1.2
P10809_1086
0.9
P10809_1113
2.1
Memory CD8 T-cell nTPM: 3.5
Samples: 5
Max nTPM: 6.6
Min nTPM: 0.6
P10809_1012
6.6
P10809_1027
0.6
P10809_1046
5.3
P10809_1065
1.7
P10809_1111
3.1
Naive CD4 T-cell nTPM: 1.3
Samples: 6
Max nTPM: 3.5
Min nTPM: 0.1
P10809_1015
1.0
P10809_1030
0.8
P10809_1049
0.1
P10809_1068
3.5
P10809_1085
1.0
P10809_1112
1.3
Naive CD8 T-cell nTPM: 0.5
Samples: 6
Max nTPM: 1.5
Min nTPM: 0.0
P10809_1016
0.4
P10809_1031
0.0
P10809_1050
1.2
P10809_1069
0.0
P10809_1087
0.1
P10809_1110
1.5
T-reg nTPM: 0.4
Samples: 6
Max nTPM: 2.3
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
2.3
P10809_1094
0.0
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
416.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 26.3
Min nTPM: 0.7
RHH5202_R3573
0.7
RHH5230_R3602
8.9
RHH5259_R3631
4.6
RHH5288_R3660
26.3
Effector memory CD8 T-cell nTPM: 7.5
Samples: 4
Max nTPM: 11.8
Min nTPM: 4.1
RHH5203_R3574
9.5
RHH5231_R3603
4.1
RHH5260_R3632
4.5
RHH5289_R3661
11.8
MAIT T-cell nTPM: 416.6
Samples: 4
Max nTPM: 545.1
Min nTPM: 309.7
RHH5233_R3605
395.7
RHH5205_R3576
545.1
RHH5262_R3634
309.7
RHH5297_R3663
415.8
Memory CD4 T-cell TFH nTPM: 17.7
Samples: 4
Max nTPM: 27.9
Min nTPM: 7.4
RHH5300_R3666
26.4
RHH5236_R3608
27.9
RHH5265_R3637
7.4
RHH5208_R3579
9.0
Memory CD4 T-cell Th1 nTPM: 14.0
Samples: 4
Max nTPM: 17.1
Min nTPM: 12.5
RHH5210_R3581
12.7
RHH5302_R3668
13.6
RHH5238_R3610
17.1
RHH5267_R3639
12.5
Memory CD4 T-cell Th1/Th17 nTPM: 26.4
Samples: 4
Max nTPM: 36.3
Min nTPM: 11.1
RHH5303_R3669
36.3
RHH5211_R3582
34.7
RHH5239_R3611
11.1
RHH5268_R3640
23.5
Memory CD4 T-cell Th17 nTPM: 58.0
Samples: 4
Max nTPM: 106.5
Min nTPM: 30.7
RHH5304_R3670
106.5
RHH5212_R3583
48.2
RHH5240_R3612
30.7
RHH5269_R3641
46.5
Memory CD4 T-cell Th2 nTPM: 73.8
Samples: 4
Max nTPM: 109.3
Min nTPM: 43.8
RHH5305_R3671
109.3
RHH5213_R3584
60.3
RHH5241_R3613
43.8
RHH5270_R3642
81.6
Naive CD4 T-cell nTPM: 12.6
Samples: 4
Max nTPM: 17.4
Min nTPM: 8.2
RHH5306_R3672
17.4
RHH5214_R3585
8.2
RHH5242_R3614
13.3
RHH5271_R3643
11.3
Naive CD8 T-cell nTPM: 8.0
Samples: 4
Max nTPM: 12.6
Min nTPM: 3.5
RHH5201_R3572
7.6
RHH5229_R3601
3.5
RHH5258_R3630
8.1
RHH5287_R3659
12.6
Non-Vd2 gdTCR nTPM: 40.4
Samples: 4
Max nTPM: 84.3
Min nTPM: 6.6
RHH5235_R3607
84.3
RHH5264_R3636
6.6
RHH5207_R3578
58.1
RHH5299_R3665
12.6
T-reg nTPM: 26.3
Samples: 4
Max nTPM: 38.0
Min nTPM: 15.3
RHH5301_R3667
27.8
RHH5237_R3609
38.0
RHH5266_R3638
24.0
RHH5209_R3580
15.3
Terminal effector memory CD4 T-cell nTPM: 0.4
Samples: 2
Max nTPM: 0.7
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
0.7
Terminal effector memory CD8 T-cell nTPM: 4.0
Samples: 4
Max nTPM: 5.8
Min nTPM: 0.4
RHH5232_R3604
4.8
RHH5204_R3575
5.8
RHH5261_R3633
4.8
RHH5296_R3662
0.4
Vd2 gdTCR nTPM: 280.3
Samples: 4
Max nTPM: 309.7
Min nTPM: 212.0
RHH5234_R3606
212.0
RHH5206_R3577
309.7
RHH5263_R3635
296.8
RHH5298_R3664
302.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
