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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
152.5
nTPM
Monaco:
452.5
nTPM
Schmiedel:
478.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.5
HPA sample
nTPM
gdT-cell nTPM: 101.5
Samples: 6
Max nTPM: 143.9
Min nTPM: 60.2
P10809_1007
117.4
P10809_1022
143.9
P10809_1041
110.6
P10809_1060
84.5
P10809_1077
92.5
P10809_1098
60.2
MAIT T-cell nTPM: 149.1
Samples: 6
Max nTPM: 184.4
Min nTPM: 103.0
P10809_1006
184.4
P10809_1024
175.5
P10809_1043
140.9
P10809_1062
139.2
P10809_1083
151.7
P10809_1097
103.0
Memory CD4 T-cell nTPM: 103.2
Samples: 6
Max nTPM: 138.4
Min nTPM: 59.3
P10809_1014
138.4
P10809_1026
125.3
P10809_1045
112.5
P10809_1064
86.2
P10809_1086
97.5
P10809_1113
59.3
Memory CD8 T-cell nTPM: 117.5
Samples: 5
Max nTPM: 156.0
Min nTPM: 58.9
P10809_1012
156.0
P10809_1027
130.6
P10809_1046
138.0
P10809_1065
104.2
P10809_1111
58.9
Naive CD4 T-cell nTPM: 79.8
Samples: 6
Max nTPM: 103.6
Min nTPM: 37.1
P10809_1015
103.6
P10809_1030
102.2
P10809_1049
89.8
P10809_1068
77.4
P10809_1085
68.9
P10809_1112
37.1
Naive CD8 T-cell nTPM: 96.1
Samples: 6
Max nTPM: 127.4
Min nTPM: 53.7
P10809_1016
127.4
P10809_1031
91.9
P10809_1050
92.2
P10809_1069
111.1
P10809_1087
100.3
P10809_1110
53.7
T-reg nTPM: 152.5
Samples: 6
Max nTPM: 180.7
Min nTPM: 97.3
P10809_1018
168.6
P10809_1037
180.7
P10809_1056
174.2
P10809_1075
97.3
P10809_1094
170.4
P10809_1106
123.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
452.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 327.0
Samples: 4
Max nTPM: 368.0
Min nTPM: 289.7
RHH5202_R3573
368.0
RHH5230_R3602
353.3
RHH5259_R3631
289.7
RHH5288_R3660
297.1
Effector memory CD8 T-cell nTPM: 394.8
Samples: 4
Max nTPM: 503.0
Min nTPM: 308.4
RHH5203_R3574
436.2
RHH5231_R3603
308.4
RHH5260_R3632
331.5
RHH5289_R3661
503.0
MAIT T-cell nTPM: 452.5
Samples: 4
Max nTPM: 505.8
Min nTPM: 429.4
RHH5233_R3605
505.8
RHH5205_R3576
440.5
RHH5262_R3634
434.4
RHH5297_R3663
429.4
Memory CD4 T-cell TFH nTPM: 329.6
Samples: 4
Max nTPM: 341.1
Min nTPM: 320.8
RHH5300_R3666
325.8
RHH5236_R3608
341.1
RHH5265_R3637
330.7
RHH5208_R3579
320.8
Memory CD4 T-cell Th1 nTPM: 269.3
Samples: 4
Max nTPM: 301.5
Min nTPM: 225.6
RHH5210_R3581
274.9
RHH5302_R3668
275.1
RHH5238_R3610
225.6
RHH5267_R3639
301.5
Memory CD4 T-cell Th1/Th17 nTPM: 367.9
Samples: 4
Max nTPM: 470.9
Min nTPM: 257.9
RHH5303_R3669
404.7
RHH5211_R3582
470.9
RHH5239_R3611
257.9
RHH5268_R3640
338.0
Memory CD4 T-cell Th17 nTPM: 377.7
Samples: 4
Max nTPM: 391.5
Min nTPM: 365.6
RHH5304_R3670
391.5
RHH5212_R3583
375.3
RHH5240_R3612
365.6
RHH5269_R3641
378.3
Memory CD4 T-cell Th2 nTPM: 320.1
Samples: 4
Max nTPM: 353.8
Min nTPM: 296.2
RHH5305_R3671
296.2
RHH5213_R3584
353.8
RHH5241_R3613
318.9
RHH5270_R3642
311.4
Naive CD4 T-cell nTPM: 221.3
Samples: 4
Max nTPM: 224.6
Min nTPM: 214.8
RHH5306_R3672
214.8
RHH5214_R3585
224.6
RHH5242_R3614
222.1
RHH5271_R3643
223.8
Naive CD8 T-cell nTPM: 291.5
Samples: 4
Max nTPM: 327.2
Min nTPM: 224.4
RHH5201_R3572
327.2
RHH5229_R3601
224.4
RHH5258_R3630
306.8
RHH5287_R3659
307.4
Non-Vd2 gdTCR nTPM: 310.0
Samples: 4
Max nTPM: 321.6
Min nTPM: 287.1
RHH5235_R3607
320.7
RHH5264_R3636
321.6
RHH5207_R3578
310.5
RHH5299_R3665
287.1
T-reg nTPM: 304.2
Samples: 4
Max nTPM: 315.1
Min nTPM: 293.2
RHH5301_R3667
297.3
RHH5237_R3609
311.3
RHH5266_R3638
293.2
RHH5209_R3580
315.1
Terminal effector memory CD4 T-cell nTPM: 275.1
Samples: 2
Max nTPM: 291.5
Min nTPM: 258.7
RHH5243_R3615
291.5
RHH5272_R3644
258.7
Terminal effector memory CD8 T-cell nTPM: 304.9
Samples: 4
Max nTPM: 342.2
Min nTPM: 270.0
RHH5232_R3604
319.2
RHH5204_R3575
270.0
RHH5261_R3633
288.1
RHH5296_R3662
342.2
Vd2 gdTCR nTPM: 345.8
Samples: 4
Max nTPM: 395.0
Min nTPM: 306.9
RHH5234_R3606
395.0
RHH5206_R3577
307.6
RHH5263_R3635
373.8
RHH5298_R3664
306.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
