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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.3
nTPM
Monaco:
371.8
nTPM
Schmiedel:
137.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.3
HPA sample
nTPM
gdT-cell nTPM: 39.1
Samples: 6
Max nTPM: 63.6
Min nTPM: 27.7
P10809_1007
63.6
P10809_1022
35.3
P10809_1041
30.6
P10809_1060
27.7
P10809_1077
27.8
P10809_1098
49.6
MAIT T-cell nTPM: 39.3
Samples: 6
Max nTPM: 78.6
Min nTPM: 20.4
P10809_1006
78.6
P10809_1024
25.6
P10809_1043
35.7
P10809_1062
36.7
P10809_1083
20.4
P10809_1097
39.0
Memory CD4 T-cell nTPM: 27.4
Samples: 6
Max nTPM: 51.6
Min nTPM: 20.0
P10809_1014
51.6
P10809_1026
22.2
P10809_1045
23.7
P10809_1064
21.4
P10809_1086
20.0
P10809_1113
25.5
Memory CD8 T-cell nTPM: 33.8
Samples: 5
Max nTPM: 66.7
Min nTPM: 19.1
P10809_1012
66.7
P10809_1027
19.1
P10809_1046
29.4
P10809_1065
29.0
P10809_1111
24.8
Naive CD4 T-cell nTPM: 16.2
Samples: 6
Max nTPM: 33.7
Min nTPM: 8.3
P10809_1015
33.7
P10809_1030
11.1
P10809_1049
8.3
P10809_1068
12.8
P10809_1085
15.1
P10809_1112
16.4
Naive CD8 T-cell nTPM: 23.2
Samples: 6
Max nTPM: 42.3
Min nTPM: 14.7
P10809_1016
42.3
P10809_1031
18.8
P10809_1050
19.0
P10809_1069
22.1
P10809_1087
22.1
P10809_1110
14.7
T-reg nTPM: 31.9
Samples: 6
Max nTPM: 76.7
Min nTPM: 13.8
P10809_1018
76.7
P10809_1037
35.5
P10809_1056
26.1
P10809_1075
17.9
P10809_1094
21.3
P10809_1106
13.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
371.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 286.5
Samples: 4
Max nTPM: 338.6
Min nTPM: 236.4
RHH5202_R3573
236.4
RHH5230_R3602
329.1
RHH5259_R3631
338.6
RHH5288_R3660
241.9
Effector memory CD8 T-cell nTPM: 312.5
Samples: 4
Max nTPM: 383.4
Min nTPM: 279.5
RHH5203_R3574
288.3
RHH5231_R3603
298.6
RHH5260_R3632
383.4
RHH5289_R3661
279.5
MAIT T-cell nTPM: 371.8
Samples: 4
Max nTPM: 434.6
Min nTPM: 330.5
RHH5233_R3605
342.8
RHH5205_R3576
434.6
RHH5262_R3634
379.2
RHH5297_R3663
330.5
Memory CD4 T-cell TFH nTPM: 230.8
Samples: 4
Max nTPM: 267.4
Min nTPM: 185.9
RHH5300_R3666
267.4
RHH5236_R3608
185.9
RHH5265_R3637
251.5
RHH5208_R3579
218.4
Memory CD4 T-cell Th1 nTPM: 233.4
Samples: 4
Max nTPM: 279.3
Min nTPM: 207.0
RHH5210_R3581
207.0
RHH5302_R3668
213.4
RHH5238_R3610
279.3
RHH5267_R3639
233.9
Memory CD4 T-cell Th1/Th17 nTPM: 272.7
Samples: 4
Max nTPM: 325.7
Min nTPM: 236.3
RHH5303_R3669
277.6
RHH5211_R3582
251.0
RHH5239_R3611
325.7
RHH5268_R3640
236.3
Memory CD4 T-cell Th17 nTPM: 290.8
Samples: 4
Max nTPM: 320.0
Min nTPM: 256.3
RHH5304_R3670
315.2
RHH5212_R3583
256.3
RHH5240_R3612
320.0
RHH5269_R3641
271.8
Memory CD4 T-cell Th2 nTPM: 234.4
Samples: 4
Max nTPM: 250.5
Min nTPM: 227.1
RHH5305_R3671
250.5
RHH5213_R3584
232.4
RHH5241_R3613
227.1
RHH5270_R3642
227.7
Naive CD4 T-cell nTPM: 137.7
Samples: 4
Max nTPM: 151.1
Min nTPM: 120.9
RHH5306_R3672
146.4
RHH5214_R3585
120.9
RHH5242_R3614
151.1
RHH5271_R3643
132.4
Naive CD8 T-cell nTPM: 182.0
Samples: 4
Max nTPM: 232.9
Min nTPM: 141.3
RHH5201_R3572
141.3
RHH5229_R3601
232.9
RHH5258_R3630
171.2
RHH5287_R3659
182.6
Non-Vd2 gdTCR nTPM: 265.9
Samples: 4
Max nTPM: 286.3
Min nTPM: 234.1
RHH5235_R3607
286.3
RHH5264_R3636
274.3
RHH5207_R3578
268.8
RHH5299_R3665
234.1
T-reg nTPM: 215.4
Samples: 4
Max nTPM: 224.3
Min nTPM: 206.1
RHH5301_R3667
221.2
RHH5237_R3609
210.0
RHH5266_R3638
224.3
RHH5209_R3580
206.1
Terminal effector memory CD4 T-cell nTPM: 331.8
Samples: 2
Max nTPM: 355.1
Min nTPM: 308.5
RHH5243_R3615
308.5
RHH5272_R3644
355.1
Terminal effector memory CD8 T-cell nTPM: 290.0
Samples: 4
Max nTPM: 352.0
Min nTPM: 201.8
RHH5232_R3604
352.0
RHH5204_R3575
201.8
RHH5261_R3633
330.3
RHH5296_R3662
276.0
Vd2 gdTCR nTPM: 347.1
Samples: 4
Max nTPM: 392.2
Min nTPM: 287.8
RHH5234_R3606
369.6
RHH5206_R3577
338.9
RHH5263_R3635
392.2
RHH5298_R3664
287.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
