We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
193.5
nTPM
Monaco:
271.8
nTPM
Schmiedel:
127.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.5
HPA sample
nTPM
gdT-cell nTPM: 189.1
Samples: 6
Max nTPM: 271.0
Min nTPM: 146.4
P10809_1007
150.2
P10809_1022
271.0
P10809_1041
205.8
P10809_1060
146.4
P10809_1077
156.4
P10809_1098
204.9
MAIT T-cell nTPM: 193.5
Samples: 6
Max nTPM: 243.4
Min nTPM: 140.4
P10809_1006
140.4
P10809_1024
243.4
P10809_1043
213.7
P10809_1062
207.8
P10809_1083
151.3
P10809_1097
204.6
Memory CD4 T-cell nTPM: 108.7
Samples: 6
Max nTPM: 123.9
Min nTPM: 90.9
P10809_1014
90.9
P10809_1026
107.6
P10809_1045
118.0
P10809_1064
118.3
P10809_1086
123.9
P10809_1113
93.7
Memory CD8 T-cell nTPM: 161.4
Samples: 5
Max nTPM: 200.5
Min nTPM: 130.3
P10809_1012
130.3
P10809_1027
188.0
P10809_1046
200.5
P10809_1065
149.1
P10809_1111
138.9
Naive CD4 T-cell nTPM: 97.6
Samples: 6
Max nTPM: 109.4
Min nTPM: 65.2
P10809_1015
65.2
P10809_1030
109.4
P10809_1049
108.5
P10809_1068
94.7
P10809_1085
107.5
P10809_1112
100.4
Naive CD8 T-cell nTPM: 125.1
Samples: 6
Max nTPM: 153.9
Min nTPM: 74.4
P10809_1016
74.4
P10809_1031
123.5
P10809_1050
133.4
P10809_1069
149.0
P10809_1087
153.9
P10809_1110
116.6
T-reg nTPM: 91.4
Samples: 6
Max nTPM: 132.9
Min nTPM: 72.4
P10809_1018
72.9
P10809_1037
72.4
P10809_1056
132.9
P10809_1075
83.2
P10809_1094
94.3
P10809_1106
92.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
271.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 175.4
Samples: 4
Max nTPM: 219.3
Min nTPM: 149.7
RHH5202_R3573
149.7
RHH5230_R3602
219.3
RHH5259_R3631
155.3
RHH5288_R3660
177.1
Effector memory CD8 T-cell nTPM: 246.5
Samples: 4
Max nTPM: 271.5
Min nTPM: 209.0
RHH5203_R3574
209.0
RHH5231_R3603
266.7
RHH5260_R3632
271.5
RHH5289_R3661
238.9
MAIT T-cell nTPM: 258.0
Samples: 4
Max nTPM: 303.7
Min nTPM: 205.3
RHH5233_R3605
303.7
RHH5205_R3576
274.2
RHH5262_R3634
248.6
RHH5297_R3663
205.3
Memory CD4 T-cell TFH nTPM: 125.1
Samples: 4
Max nTPM: 142.4
Min nTPM: 95.4
RHH5300_R3666
95.4
RHH5236_R3608
142.4
RHH5265_R3637
129.3
RHH5208_R3579
133.3
Memory CD4 T-cell Th1 nTPM: 147.5
Samples: 4
Max nTPM: 186.8
Min nTPM: 132.1
RHH5210_R3581
134.2
RHH5302_R3668
136.9
RHH5238_R3610
132.1
RHH5267_R3639
186.8
Memory CD4 T-cell Th1/Th17 nTPM: 168.7
Samples: 4
Max nTPM: 188.5
Min nTPM: 134.8
RHH5303_R3669
188.5
RHH5211_R3582
181.3
RHH5239_R3611
134.8
RHH5268_R3640
170.1
Memory CD4 T-cell Th17 nTPM: 168.3
Samples: 4
Max nTPM: 192.1
Min nTPM: 148.3
RHH5304_R3670
169.0
RHH5212_R3583
163.6
RHH5240_R3612
192.1
RHH5269_R3641
148.3
Memory CD4 T-cell Th2 nTPM: 138.3
Samples: 4
Max nTPM: 158.0
Min nTPM: 91.6
RHH5305_R3671
91.6
RHH5213_R3584
158.0
RHH5241_R3613
156.2
RHH5270_R3642
147.5
Naive CD4 T-cell nTPM: 130.5
Samples: 4
Max nTPM: 141.7
Min nTPM: 114.7
RHH5306_R3672
129.8
RHH5214_R3585
114.7
RHH5242_R3614
141.7
RHH5271_R3643
135.8
Naive CD8 T-cell nTPM: 137.8
Samples: 4
Max nTPM: 152.2
Min nTPM: 120.4
RHH5201_R3572
141.4
RHH5229_R3601
120.4
RHH5258_R3630
152.2
RHH5287_R3659
137.2
Non-Vd2 gdTCR nTPM: 271.6
Samples: 4
Max nTPM: 342.2
Min nTPM: 214.0
RHH5235_R3607
342.2
RHH5264_R3636
256.8
RHH5207_R3578
273.5
RHH5299_R3665
214.0
T-reg nTPM: 112.8
Samples: 4
Max nTPM: 126.3
Min nTPM: 99.1
RHH5301_R3667
99.1
RHH5237_R3609
126.3
RHH5266_R3638
120.1
RHH5209_R3580
105.6
Terminal effector memory CD4 T-cell nTPM: 259.3
Samples: 2
Max nTPM: 296.8
Min nTPM: 221.7
RHH5243_R3615
296.8
RHH5272_R3644
221.7
Terminal effector memory CD8 T-cell nTPM: 271.8
Samples: 4
Max nTPM: 334.9
Min nTPM: 220.9
RHH5232_R3604
286.7
RHH5204_R3575
220.9
RHH5261_R3633
334.9
RHH5296_R3662
244.6
Vd2 gdTCR nTPM: 243.8
Samples: 4
Max nTPM: 279.6
Min nTPM: 220.7
RHH5234_R3606
279.6
RHH5206_R3577
229.3
RHH5263_R3635
245.7
RHH5298_R3664
220.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
