We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.8
nTPM
Monaco:
24.2
nTPM
Schmiedel:
48.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.8
HPA sample
nTPM
gdT-cell nTPM: 35.6
Samples: 6
Max nTPM: 51.9
Min nTPM: 22.6
P10809_1007
22.6
P10809_1022
30.0
P10809_1041
51.9
P10809_1060
36.8
P10809_1077
40.6
P10809_1098
31.4
MAIT T-cell nTPM: 22.9
Samples: 6
Max nTPM: 36.3
Min nTPM: 9.1
P10809_1006
9.1
P10809_1024
20.3
P10809_1043
32.0
P10809_1062
26.8
P10809_1083
13.1
P10809_1097
36.3
Memory CD4 T-cell nTPM: 44.4
Samples: 6
Max nTPM: 72.4
Min nTPM: 23.0
P10809_1014
23.0
P10809_1026
72.4
P10809_1045
42.2
P10809_1064
51.2
P10809_1086
39.4
P10809_1113
38.3
Memory CD8 T-cell nTPM: 40.4
Samples: 5
Max nTPM: 66.0
Min nTPM: 17.2
P10809_1012
17.2
P10809_1027
66.0
P10809_1046
35.2
P10809_1065
40.3
P10809_1111
43.5
Naive CD4 T-cell nTPM: 41.6
Samples: 6
Max nTPM: 78.2
Min nTPM: 15.8
P10809_1015
15.8
P10809_1030
78.2
P10809_1049
52.9
P10809_1068
31.5
P10809_1085
39.3
P10809_1112
31.8
Naive CD8 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 36.9
Min nTPM: 16.7
P10809_1016
16.7
P10809_1031
36.9
P10809_1050
34.6
P10809_1069
36.5
P10809_1087
34.8
P10809_1110
36.4
T-reg nTPM: 52.8
Samples: 6
Max nTPM: 92.7
Min nTPM: 21.4
P10809_1018
21.4
P10809_1037
37.7
P10809_1056
44.6
P10809_1075
92.7
P10809_1094
53.3
P10809_1106
67.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.7
Samples: 4
Max nTPM: 15.9
Min nTPM: 10.4
RHH5202_R3573
10.4
RHH5230_R3602
15.9
RHH5259_R3631
13.1
RHH5288_R3660
15.2
Effector memory CD8 T-cell nTPM: 13.7
Samples: 4
Max nTPM: 23.4
Min nTPM: 8.1
RHH5203_R3574
8.1
RHH5231_R3603
15.3
RHH5260_R3632
23.4
RHH5289_R3661
8.1
MAIT T-cell nTPM: 13.6
Samples: 4
Max nTPM: 15.1
Min nTPM: 9.8
RHH5233_R3605
14.6
RHH5205_R3576
14.9
RHH5262_R3634
9.8
RHH5297_R3663
15.1
Memory CD4 T-cell TFH nTPM: 17.2
Samples: 4
Max nTPM: 25.1
Min nTPM: 11.2
RHH5300_R3666
11.2
RHH5236_R3608
25.1
RHH5265_R3637
15.3
RHH5208_R3579
17.3
Memory CD4 T-cell Th1 nTPM: 24.2
Samples: 4
Max nTPM: 42.0
Min nTPM: 9.3
RHH5210_R3581
9.3
RHH5302_R3668
24.7
RHH5238_R3610
42.0
RHH5267_R3639
20.8
Memory CD4 T-cell Th1/Th17 nTPM: 16.4
Samples: 4
Max nTPM: 24.1
Min nTPM: 10.8
RHH5303_R3669
10.8
RHH5211_R3582
14.8
RHH5239_R3611
24.1
RHH5268_R3640
15.9
Memory CD4 T-cell Th17 nTPM: 19.2
Samples: 4
Max nTPM: 28.0
Min nTPM: 12.8
RHH5304_R3670
12.8
RHH5212_R3583
19.7
RHH5240_R3612
28.0
RHH5269_R3641
16.4
Memory CD4 T-cell Th2 nTPM: 20.8
Samples: 4
Max nTPM: 24.3
Min nTPM: 16.2
RHH5305_R3671
24.3
RHH5213_R3584
18.6
RHH5241_R3613
24.2
RHH5270_R3642
16.2
Naive CD4 T-cell nTPM: 16.5
Samples: 4
Max nTPM: 20.9
Min nTPM: 14.8
RHH5306_R3672
15.3
RHH5214_R3585
15.0
RHH5242_R3614
20.9
RHH5271_R3643
14.8
Naive CD8 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 17.4
Min nTPM: 6.8
RHH5201_R3572
6.9
RHH5229_R3601
6.8
RHH5258_R3630
12.4
RHH5287_R3659
17.4
Non-Vd2 gdTCR nTPM: 11.7
Samples: 4
Max nTPM: 13.4
Min nTPM: 9.2
RHH5235_R3607
9.2
RHH5264_R3636
12.0
RHH5207_R3578
12.1
RHH5299_R3665
13.4
T-reg nTPM: 18.2
Samples: 4
Max nTPM: 23.1
Min nTPM: 13.9
RHH5301_R3667
17.2
RHH5237_R3609
18.4
RHH5266_R3638
23.1
RHH5209_R3580
13.9
Terminal effector memory CD4 T-cell nTPM: 14.3
Samples: 2
Max nTPM: 15.6
Min nTPM: 12.9
RHH5243_R3615
12.9
RHH5272_R3644
15.6
Terminal effector memory CD8 T-cell nTPM: 13.1
Samples: 4
Max nTPM: 20.0
Min nTPM: 5.1
RHH5232_R3604
15.1
RHH5204_R3575
12.1
RHH5261_R3633
20.0
RHH5296_R3662
5.1
Vd2 gdTCR nTPM: 14.3
Samples: 4
Max nTPM: 18.1
Min nTPM: 10.3
RHH5234_R3606
15.7
RHH5206_R3577
10.3
RHH5263_R3635
12.9
RHH5298_R3664
18.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
