HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.4 nTPM
HPA Brain:53.0 nTPM
GTEx:46.4 nTPM
FANTOM5:111.3 Scaled Tags Per Million
Pig:45.7 nTPM
Mouse:60.9 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018133
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.0
Sample id Sample description nTPM
Hippocampus
nTPM: 48.9
1911 Female, age 85, right hemisphere 57.2
1898 Male, age 80, left hemisphere 56.4
1855 Male, age 76, left hemisphere 48.3
2529 Female, age 94, left hemisphere 47.3
2148 Female, age 91, left hemisphere 42.3
2621 Female, age 67, right hemisphere 42.1
Dentate gyrus
nTPM: 45.5
2010 Male, age 76, both hemispheres 60.7
2530 Female, age 94, left hemisphere 55.1
2528 Male, age 74, both hemispheres 43.7
2246 Female, age 85, both hemispheres 41.6
1927 Female, age 91, both hemispheres 41.5
2531 Female, age 67, both hemispheres 30.4
Entorhinal gyrus
nTPM: 43.0
2117 Female, age 91, right hemisphere 56.1
1938 Female, age 85, left hemisphere 46.0
2764 Male, age 80, right hemisphere 43.3
2686 Male, age 75, right hemisphere 42.5
1787 Male, age 76, left hemisphere 38.8
2613 Female, age 94, left hemisphere 31.2
Hippocampus, CA1
nTPM: 45.7
1873 Female, age 85, both hemispheres 52.5
2045 Male, age 76, both hemispheres 46.8
2749 Male, age 80, left hemisphere 46.8
2082 Female, age 91, right hemisphere 41.8
2527 Male, age 74, both hemispheres 40.6
Hippocampus, CA2
nTPM: 48.2
1963 Male, age 80, left hemisphere 53.2
1892 Male, age 76, both hemispheres 52.0
2249 Male, age 74, both hemispheres 48.4
1940 Female, age 85, left hemisphere 48.1
2437 Female, age 94, left hemisphere 44.5
2113 Female, age 91, right hemisphere 42.9
Hippocampus, CA3
nTPM: 41.7
1891 Female, age 85, both hemispheres 65.0
1867 Male, age 76, both hemispheres 53.6
2137 Male, age 80, left hemisphere 40.3
2436 Male, age 74, both hemispheres 37.2
2861 Female, age 67, both hemispheres 28.6
2620 Female, age 94, left hemisphere 25.3
Parahippocampal cortex
nTPM: 41.7
2018 Male, age 76, both hemispheres 50.2
1850 Male, age 80, both hemispheres 48.0
2692 Male, age 74, both hemispheres 47.9
1933 Female, age 85, both hemispheres 46.7
1990 Female, age 91, right hemisphere 42.1
2532 Female, age 72, left hemisphere 40.8
2245 Female, age 91, both hemispheres 37.8
2250 Female, age 67, right hemisphere 36.8
2693 Female, age 94, both hemispheres 35.1
2622 Female, age 67, right hemisphere 31.7
Perirhinal gyrus
nTPM: 38.5
1841 Female, age 85, right hemisphere 43.7
1847 Female, age 91, left hemisphere 39.9
1794 Male, age 80, right hemisphere 39.2
2848 Male, age 76, right hemisphere 36.0
2521 Female, age 94, right hemisphere 33.5
Subiculum
nTPM: 53.0
2042 Male, age 76, both hemispheres 73.5
1901 Male, age 80, both hemispheres 58.3
1977 Female, age 85, both hemispheres 52.6
2729 Female, age 91, right hemisphere 47.5
2438 Female, age 94, left hemisphere 46.6
2619 Male, age 74, both hemispheres 39.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.4
Samples: 197

Max nTPM: 126.3
Min nTPM: 12.5
Std nTPM: 17.3
Median nTPM: 42.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 126.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 113.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 109.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 102.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 95.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 86.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 86.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 84.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 80.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 77.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 76.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.3
FF:10153-102I9 76 years, female 131.2
FF:10169-103B7 60 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.7
Pig sample Sample description nTPM
Subiculum
nTPM: 35.1
Samples: 4

Max nTPM: 43.1
Min nTPM: 29.0
Sample A Female 43.1
Sample B Female 36.8
Sample C Male 29.0
Sample D Male 31.5
Dorsal hippocampus
nTPM: 45.7
Samples: 4

Max nTPM: 56.1
Min nTPM: 36.9
Sample A Female 56.1
Sample B Female 43.1
Sample C Male 46.8
Sample D Male 36.9
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 34.6
Min nTPM: 26.5
Sample A Female 27.3
Sample B Female 34.6
Sample C Male 34.1
Sample D Male 26.5
Ventral hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 37.4
Min nTPM: 29.5
Sample A Female 37.2
Sample B Female 34.4
Sample C Male 29.5
Sample D Male 37.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 57.4
Min nTPM: 55.2
Sample A Male 55.3
Sample B Male 55.2
Sample C Female 55.2
Sample D Female 57.4
Hippocampal formation
nTPM: 60.9
Samples: 4

Max nTPM: 64.6
Min nTPM: 55.8
Sample A Male 64.2
Sample B Male 55.8
Sample C Female 64.6
Sample D Female 59.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
564645 Antisense, RP_040826_01_B01, Mouse strain C57BL/6J (56 days, male) 3.3

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