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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
296.2
nTPM
Monaco:
900.2
nTPM
Schmiedel:
773.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
296.2
HPA sample
nTPM
gdT-cell nTPM: 212.3
Samples: 6
Max nTPM: 266.8
Min nTPM: 143.1
P10809_1007
143.1
P10809_1022
266.8
P10809_1041
212.8
P10809_1060
242.1
P10809_1077
195.9
P10809_1098
213.3
MAIT T-cell nTPM: 276.9
Samples: 6
Max nTPM: 365.6
Min nTPM: 241.2
P10809_1006
253.9
P10809_1024
365.6
P10809_1043
241.2
P10809_1062
284.5
P10809_1083
246.9
P10809_1097
269.4
Memory CD4 T-cell nTPM: 237.6
Samples: 6
Max nTPM: 274.8
Min nTPM: 205.9
P10809_1014
205.9
P10809_1026
210.9
P10809_1045
274.8
P10809_1064
211.5
P10809_1086
267.8
P10809_1113
254.6
Memory CD8 T-cell nTPM: 249.8
Samples: 5
Max nTPM: 265.8
Min nTPM: 221.9
P10809_1012
221.9
P10809_1027
234.7
P10809_1046
261.6
P10809_1065
265.8
P10809_1111
265.0
Naive CD4 T-cell nTPM: 206.4
Samples: 6
Max nTPM: 237.1
Min nTPM: 174.7
P10809_1015
174.7
P10809_1030
194.9
P10809_1049
187.2
P10809_1068
237.1
P10809_1085
219.2
P10809_1112
225.0
Naive CD8 T-cell nTPM: 213.5
Samples: 6
Max nTPM: 259.1
Min nTPM: 148.1
P10809_1016
148.1
P10809_1031
196.3
P10809_1050
212.5
P10809_1069
247.3
P10809_1087
259.1
P10809_1110
217.8
T-reg nTPM: 296.2
Samples: 6
Max nTPM: 352.4
Min nTPM: 264.6
P10809_1018
264.6
P10809_1037
352.4
P10809_1056
278.9
P10809_1075
280.1
P10809_1094
303.3
P10809_1106
298.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
900.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 794.7
Samples: 4
Max nTPM: 887.9
Min nTPM: 668.6
RHH5202_R3573
795.3
RHH5230_R3602
826.9
RHH5259_R3631
887.9
RHH5288_R3660
668.6
Effector memory CD8 T-cell nTPM: 852.0
Samples: 4
Max nTPM: 919.9
Min nTPM: 740.9
RHH5203_R3574
849.1
RHH5231_R3603
740.9
RHH5260_R3632
919.9
RHH5289_R3661
898.1
MAIT T-cell nTPM: 776.1
Samples: 4
Max nTPM: 946.1
Min nTPM: 596.2
RHH5233_R3605
817.2
RHH5205_R3576
946.1
RHH5262_R3634
744.8
RHH5297_R3663
596.2
Memory CD4 T-cell TFH nTPM: 808.3
Samples: 4
Max nTPM: 985.3
Min nTPM: 595.7
RHH5300_R3666
595.7
RHH5236_R3608
985.3
RHH5265_R3637
763.8
RHH5208_R3579
888.4
Memory CD4 T-cell Th1 nTPM: 777.1
Samples: 4
Max nTPM: 1061.1
Min nTPM: 610.3
RHH5210_R3581
676.4
RHH5302_R3668
610.3
RHH5238_R3610
1061.1
RHH5267_R3639
760.4
Memory CD4 T-cell Th1/Th17 nTPM: 895.9
Samples: 4
Max nTPM: 1228.0
Min nTPM: 767.3
RHH5303_R3669
767.3
RHH5211_R3582
815.6
RHH5239_R3611
1228.0
RHH5268_R3640
772.5
Memory CD4 T-cell Th17 nTPM: 900.2
Samples: 4
Max nTPM: 1170.7
Min nTPM: 785.5
RHH5304_R3670
803.0
RHH5212_R3583
785.5
RHH5240_R3612
1170.7
RHH5269_R3641
841.4
Memory CD4 T-cell Th2 nTPM: 747.6
Samples: 4
Max nTPM: 843.4
Min nTPM: 661.3
RHH5305_R3671
661.3
RHH5213_R3584
843.4
RHH5241_R3613
726.4
RHH5270_R3642
759.1
Naive CD4 T-cell nTPM: 627.3
Samples: 4
Max nTPM: 755.3
Min nTPM: 570.5
RHH5306_R3672
570.5
RHH5214_R3585
602.9
RHH5242_R3614
580.4
RHH5271_R3643
755.3
Naive CD8 T-cell nTPM: 621.1
Samples: 4
Max nTPM: 713.8
Min nTPM: 563.4
RHH5201_R3572
640.3
RHH5229_R3601
713.8
RHH5258_R3630
567.0
RHH5287_R3659
563.4
Non-Vd2 gdTCR nTPM: 788.9
Samples: 4
Max nTPM: 937.4
Min nTPM: 600.9
RHH5235_R3607
937.4
RHH5264_R3636
801.1
RHH5207_R3578
816.3
RHH5299_R3665
600.9
T-reg nTPM: 707.2
Samples: 4
Max nTPM: 921.6
Min nTPM: 531.7
RHH5301_R3667
531.7
RHH5237_R3609
921.6
RHH5266_R3638
676.5
RHH5209_R3580
698.8
Terminal effector memory CD4 T-cell nTPM: 855.8
Samples: 2
Max nTPM: 928.2
Min nTPM: 783.3
RHH5243_R3615
928.2
RHH5272_R3644
783.3
Terminal effector memory CD8 T-cell nTPM: 781.1
Samples: 4
Max nTPM: 882.1
Min nTPM: 644.9
RHH5232_R3604
824.1
RHH5204_R3575
644.9
RHH5261_R3633
882.1
RHH5296_R3662
773.1
Vd2 gdTCR nTPM: 752.7
Samples: 4
Max nTPM: 953.3
Min nTPM: 550.9
RHH5234_R3606
793.5
RHH5206_R3577
712.9
RHH5263_R3635
953.3
RHH5298_R3664
550.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.