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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.9
nTPM
Monaco:
54.7
nTPM
Schmiedel:
19.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.9
HPA sample
nTPM
gdT-cell nTPM: 91.7
Samples: 6
Max nTPM: 116.4
Min nTPM: 48.1
P10809_1007
48.1
P10809_1022
116.4
P10809_1041
110.6
P10809_1060
81.5
P10809_1077
90.5
P10809_1098
102.9
MAIT T-cell nTPM: 87.0
Samples: 6
Max nTPM: 143.7
Min nTPM: 43.6
P10809_1006
43.6
P10809_1024
143.7
P10809_1043
103.7
P10809_1062
64.6
P10809_1083
75.3
P10809_1097
90.9
Memory CD4 T-cell nTPM: 87.8
Samples: 6
Max nTPM: 107.3
Min nTPM: 53.0
P10809_1014
53.0
P10809_1026
107.3
P10809_1045
97.1
P10809_1064
90.9
P10809_1086
87.5
P10809_1113
90.8
Memory CD8 T-cell nTPM: 88.4
Samples: 5
Max nTPM: 100.4
Min nTPM: 60.6
P10809_1012
60.6
P10809_1027
85.9
P10809_1046
100.4
P10809_1065
99.8
P10809_1111
95.1
Naive CD4 T-cell nTPM: 100.1
Samples: 6
Max nTPM: 160.6
Min nTPM: 39.2
P10809_1015
39.2
P10809_1030
101.8
P10809_1049
160.6
P10809_1068
95.7
P10809_1085
103.9
P10809_1112
99.5
Naive CD8 T-cell nTPM: 83.6
Samples: 6
Max nTPM: 105.1
Min nTPM: 39.1
P10809_1016
39.1
P10809_1031
77.6
P10809_1050
98.2
P10809_1069
105.1
P10809_1087
88.5
P10809_1110
93.2
T-reg nTPM: 114.9
Samples: 6
Max nTPM: 146.2
Min nTPM: 73.4
P10809_1018
73.4
P10809_1037
102.8
P10809_1056
146.2
P10809_1075
100.8
P10809_1094
138.9
P10809_1106
127.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 38.6
Samples: 4
Max nTPM: 58.5
Min nTPM: 23.5
RHH5202_R3573
58.5
RHH5230_R3602
29.5
RHH5259_R3631
23.5
RHH5288_R3660
43.0
Effector memory CD8 T-cell nTPM: 49.9
Samples: 4
Max nTPM: 59.2
Min nTPM: 38.9
RHH5203_R3574
59.2
RHH5231_R3603
57.5
RHH5260_R3632
38.9
RHH5289_R3661
43.8
MAIT T-cell nTPM: 37.8
Samples: 4
Max nTPM: 45.7
Min nTPM: 28.5
RHH5233_R3605
45.7
RHH5205_R3576
28.5
RHH5262_R3634
34.8
RHH5297_R3663
42.1
Memory CD4 T-cell TFH nTPM: 45.9
Samples: 4
Max nTPM: 54.3
Min nTPM: 35.0
RHH5300_R3666
48.4
RHH5236_R3608
35.0
RHH5265_R3637
45.9
RHH5208_R3579
54.3
Memory CD4 T-cell Th1 nTPM: 43.9
Samples: 4
Max nTPM: 64.1
Min nTPM: 23.1
RHH5210_R3581
62.4
RHH5302_R3668
64.1
RHH5238_R3610
25.9
RHH5267_R3639
23.1
Memory CD4 T-cell Th1/Th17 nTPM: 41.6
Samples: 4
Max nTPM: 57.9
Min nTPM: 19.6
RHH5303_R3669
57.9
RHH5211_R3582
57.5
RHH5239_R3611
19.6
RHH5268_R3640
31.5
Memory CD4 T-cell Th17 nTPM: 28.4
Samples: 4
Max nTPM: 41.6
Min nTPM: 19.1
RHH5304_R3670
29.9
RHH5212_R3583
41.6
RHH5240_R3612
19.1
RHH5269_R3641
23.1
Memory CD4 T-cell Th2 nTPM: 49.7
Samples: 4
Max nTPM: 55.6
Min nTPM: 41.7
RHH5305_R3671
52.4
RHH5213_R3584
55.6
RHH5241_R3613
48.9
RHH5270_R3642
41.7
Naive CD4 T-cell nTPM: 45.8
Samples: 4
Max nTPM: 59.4
Min nTPM: 32.2
RHH5306_R3672
59.4
RHH5214_R3585
53.7
RHH5242_R3614
32.2
RHH5271_R3643
37.7
Naive CD8 T-cell nTPM: 42.2
Samples: 4
Max nTPM: 50.1
Min nTPM: 21.9
RHH5201_R3572
50.1
RHH5229_R3601
21.9
RHH5258_R3630
49.8
RHH5287_R3659
46.9
Non-Vd2 gdTCR nTPM: 54.7
Samples: 4
Max nTPM: 70.3
Min nTPM: 38.5
RHH5235_R3607
38.5
RHH5264_R3636
70.3
RHH5207_R3578
50.3
RHH5299_R3665
59.7
T-reg nTPM: 51.0
Samples: 4
Max nTPM: 59.1
Min nTPM: 38.1
RHH5301_R3667
59.1
RHH5237_R3609
58.1
RHH5266_R3638
38.1
RHH5209_R3580
48.7
Terminal effector memory CD4 T-cell nTPM: 41.4
Samples: 2
Max nTPM: 54.1
Min nTPM: 28.6
RHH5243_R3615
28.6
RHH5272_R3644
54.1
Terminal effector memory CD8 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 55.1
Min nTPM: 29.2
RHH5232_R3604
29.2
RHH5204_R3575
55.1
RHH5261_R3633
47.6
RHH5296_R3662
44.5
Vd2 gdTCR nTPM: 44.7
Samples: 4
Max nTPM: 61.9
Min nTPM: 32.3
RHH5234_R3606
40.1
RHH5206_R3577
61.9
RHH5263_R3635
32.3
RHH5298_R3664
44.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
