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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
138.6
nTPM
Monaco:
570.0
nTPM
Schmiedel:
744.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
138.6
HPA sample
nTPM
gdT-cell nTPM: 46.0
Samples: 6
Max nTPM: 61.5
Min nTPM: 26.1
P10809_1007
53.9
P10809_1022
53.7
P10809_1041
61.5
P10809_1060
38.9
P10809_1077
26.1
P10809_1098
41.7
MAIT T-cell nTPM: 32.9
Samples: 6
Max nTPM: 40.9
Min nTPM: 22.7
P10809_1006
40.9
P10809_1024
25.5
P10809_1043
31.4
P10809_1062
38.4
P10809_1083
22.7
P10809_1097
38.2
Memory CD4 T-cell nTPM: 109.0
Samples: 6
Max nTPM: 137.8
Min nTPM: 93.8
P10809_1014
137.8
P10809_1026
93.8
P10809_1045
107.2
P10809_1064
95.3
P10809_1086
97.2
P10809_1113
122.8
Memory CD8 T-cell nTPM: 72.5
Samples: 5
Max nTPM: 102.0
Min nTPM: 36.0
P10809_1012
102.0
P10809_1027
36.0
P10809_1046
78.7
P10809_1065
61.6
P10809_1111
84.3
Naive CD4 T-cell nTPM: 88.6
Samples: 6
Max nTPM: 115.9
Min nTPM: 51.4
P10809_1015
115.9
P10809_1030
81.4
P10809_1049
51.4
P10809_1068
91.5
P10809_1085
79.7
P10809_1112
111.9
Naive CD8 T-cell nTPM: 70.0
Samples: 6
Max nTPM: 105.2
Min nTPM: 40.9
P10809_1016
105.2
P10809_1031
73.2
P10809_1050
71.4
P10809_1069
59.9
P10809_1087
40.9
P10809_1110
69.2
T-reg nTPM: 138.6
Samples: 6
Max nTPM: 186.1
Min nTPM: 104.4
P10809_1018
186.1
P10809_1037
104.4
P10809_1056
124.0
P10809_1075
113.6
P10809_1094
169.0
P10809_1106
134.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
570.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 309.4
Samples: 4
Max nTPM: 349.8
Min nTPM: 276.0
RHH5202_R3573
297.7
RHH5230_R3602
349.8
RHH5259_R3631
314.0
RHH5288_R3660
276.0
Effector memory CD8 T-cell nTPM: 371.7
Samples: 4
Max nTPM: 469.9
Min nTPM: 310.0
RHH5203_R3574
310.0
RHH5231_R3603
469.9
RHH5260_R3632
374.1
RHH5289_R3661
332.9
MAIT T-cell nTPM: 159.7
Samples: 4
Max nTPM: 182.0
Min nTPM: 119.2
RHH5233_R3605
182.0
RHH5205_R3576
164.3
RHH5262_R3634
173.2
RHH5297_R3663
119.2
Memory CD4 T-cell TFH nTPM: 443.1
Samples: 4
Max nTPM: 481.2
Min nTPM: 399.3
RHH5300_R3666
399.3
RHH5236_R3608
481.2
RHH5265_R3637
475.7
RHH5208_R3579
416.2
Memory CD4 T-cell Th1 nTPM: 467.2
Samples: 4
Max nTPM: 640.8
Min nTPM: 371.0
RHH5210_R3581
371.0
RHH5302_R3668
434.8
RHH5238_R3610
640.8
RHH5267_R3639
422.1
Memory CD4 T-cell Th1/Th17 nTPM: 445.8
Samples: 4
Max nTPM: 579.5
Min nTPM: 374.0
RHH5303_R3669
424.5
RHH5211_R3582
405.2
RHH5239_R3611
579.5
RHH5268_R3640
374.0
Memory CD4 T-cell Th17 nTPM: 510.5
Samples: 4
Max nTPM: 708.0
Min nTPM: 425.3
RHH5304_R3670
456.2
RHH5212_R3583
425.3
RHH5240_R3612
708.0
RHH5269_R3641
452.6
Memory CD4 T-cell Th2 nTPM: 570.1
Samples: 4
Max nTPM: 618.7
Min nTPM: 491.1
RHH5305_R3671
616.0
RHH5213_R3584
618.7
RHH5241_R3613
554.5
RHH5270_R3642
491.1
Naive CD4 T-cell nTPM: 356.2
Samples: 4
Max nTPM: 395.9
Min nTPM: 334.7
RHH5306_R3672
345.7
RHH5214_R3585
334.7
RHH5242_R3614
395.9
RHH5271_R3643
348.5
Naive CD8 T-cell nTPM: 299.7
Samples: 4
Max nTPM: 361.1
Min nTPM: 254.4
RHH5201_R3572
279.5
RHH5229_R3601
361.1
RHH5258_R3630
254.4
RHH5287_R3659
303.8
Non-Vd2 gdTCR nTPM: 102.1
Samples: 4
Max nTPM: 115.7
Min nTPM: 83.7
RHH5235_R3607
105.6
RHH5264_R3636
103.3
RHH5207_R3578
83.7
RHH5299_R3665
115.7
T-reg nTPM: 353.4
Samples: 4
Max nTPM: 379.5
Min nTPM: 335.9
RHH5301_R3667
349.0
RHH5237_R3609
379.5
RHH5266_R3638
349.1
RHH5209_R3580
335.9
Terminal effector memory CD4 T-cell nTPM: 486.7
Samples: 2
Max nTPM: 712.7
Min nTPM: 260.7
RHH5243_R3615
712.7
RHH5272_R3644
260.7
Terminal effector memory CD8 T-cell nTPM: 267.8
Samples: 4
Max nTPM: 375.5
Min nTPM: 166.9
RHH5232_R3604
375.5
RHH5204_R3575
174.0
RHH5261_R3633
166.9
RHH5296_R3662
354.9
Vd2 gdTCR nTPM: 245.6
Samples: 4
Max nTPM: 327.3
Min nTPM: 186.2
RHH5234_R3606
250.7
RHH5206_R3577
218.0
RHH5263_R3635
327.3
RHH5298_R3664
186.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
