HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:35.5 nTPM
HPA Brain:103.6 nTPM
GTEx:35.5 nTPM
FANTOM5:92.1 Scaled Tags Per Million
Pig:70.2 nTPM
Mouse:63.2 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038568
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.6
Sample id Sample description nTPM
Hippocampus
nTPM: 84.3
1898 Male, age 80, left hemisphere 98.2
1855 Male, age 76, left hemisphere 93.4
2148 Female, age 91, left hemisphere 90.7
2621 Female, age 67, right hemisphere 89.7
1911 Female, age 85, right hemisphere 75.8
2529 Female, age 94, left hemisphere 58.2
Dentate gyrus
nTPM: 91.8
1927 Female, age 91, both hemispheres 112.6
2530 Female, age 94, left hemisphere 95.8
2531 Female, age 67, both hemispheres 95.0
2010 Male, age 76, both hemispheres 93.4
2246 Female, age 85, both hemispheres 77.8
2528 Male, age 74, both hemispheres 76.2
Entorhinal gyrus
nTPM: 80.2
2613 Female, age 94, left hemisphere 100.0
2764 Male, age 80, right hemisphere 94.8
1938 Female, age 85, left hemisphere 85.1
1787 Male, age 76, left hemisphere 78.8
2686 Male, age 75, right hemisphere 65.5
2117 Female, age 91, right hemisphere 57.1
Hippocampus, CA1
nTPM: 103.6
2749 Male, age 80, left hemisphere 177.1
1873 Female, age 85, both hemispheres 104.6
2045 Male, age 76, both hemispheres 92.7
2527 Male, age 74, both hemispheres 76.0
2082 Female, age 91, right hemisphere 67.6
Hippocampus, CA2
nTPM: 86.5
1963 Male, age 80, left hemisphere 120.6
1892 Male, age 76, both hemispheres 116.0
2437 Female, age 94, left hemisphere 78.3
1940 Female, age 85, left hemisphere 72.7
2113 Female, age 91, right hemisphere 66.8
2249 Male, age 74, both hemispheres 64.5
Hippocampus, CA3
nTPM: 96.9
2137 Male, age 80, left hemisphere 145.6
2620 Female, age 94, left hemisphere 102.9
2861 Female, age 67, both hemispheres 95.7
1867 Male, age 76, both hemispheres 86.9
2436 Male, age 74, both hemispheres 76.1
1891 Female, age 85, both hemispheres 74.1
Parahippocampal cortex
nTPM: 79.3
1850 Male, age 80, both hemispheres 96.0
1933 Female, age 85, both hemispheres 85.8
2245 Female, age 91, both hemispheres 84.8
2693 Female, age 94, both hemispheres 84.4
2532 Female, age 72, left hemisphere 80.9
1990 Female, age 91, right hemisphere 79.2
2622 Female, age 67, right hemisphere 77.4
2250 Female, age 67, right hemisphere 72.7
2018 Male, age 76, both hemispheres 69.8
2692 Male, age 74, both hemispheres 62.4
Perirhinal gyrus
nTPM: 96.1
1847 Female, age 91, left hemisphere 105.8
1794 Male, age 80, right hemisphere 101.6
1841 Female, age 85, right hemisphere 93.8
2521 Female, age 94, right hemisphere 93.1
2848 Male, age 76, right hemisphere 86.2
Subiculum
nTPM: 69.5
1901 Male, age 80, both hemispheres 89.2
1977 Female, age 85, both hemispheres 77.9
2729 Female, age 91, right hemisphere 71.5
2042 Male, age 76, both hemispheres 63.3
2619 Male, age 74, both hemispheres 60.1
2438 Female, age 94, left hemisphere 55.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.5
Samples: 197

Max nTPM: 92.6
Min nTPM: 8.3
Std nTPM: 16.5
Median nTPM: 32.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 88.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 76.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 74.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 74.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 67.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 67.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 66.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 65.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 65.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 65.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.1
FF:10169-103B7 60 years, female 115.2
FF:10153-102I9 76 years, female 69.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.2
Pig sample Sample description nTPM
Subiculum
nTPM: 62.0
Samples: 4

Max nTPM: 76.2
Min nTPM: 52.3
Sample A Female 76.2
Sample B Female 55.0
Sample C Male 64.6
Sample D Male 52.3
Dorsal hippocampus
nTPM: 59.5
Samples: 4

Max nTPM: 70.9
Min nTPM: 46.7
Sample A Female 69.6
Sample B Female 70.9
Sample C Male 46.7
Sample D Male 50.7
Entorhinal cortex
nTPM: 70.3
Samples: 4

Max nTPM: 79.4
Min nTPM: 64.4
Sample A Female 79.4
Sample B Female 64.4
Sample C Male 68.5
Sample D Male 68.7
Ventral hippocampus
nTPM: 67.2
Samples: 4

Max nTPM: 83.5
Min nTPM: 49.5
Sample A Female 71.2
Sample B Female 49.5
Sample C Male 83.5
Sample D Male 64.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.3
Samples: 4

Max nTPM: 72.9
Min nTPM: 58.5
Sample A Male 58.5
Sample B Male 62.1
Sample C Female 59.5
Sample D Female 72.9
Hippocampal formation
nTPM: 61.8
Samples: 4

Max nTPM: 72.0
Min nTPM: 50.9
Sample A Male 50.9
Sample B Male 68.0
Sample C Female 72.0
Sample D Female 56.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
69236700 Antisense, RP_050329_04_C01, Mouse strain C57BL/6J (56 days, male) 17.4

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