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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
28.6
nTPM
Monaco:
18.1
nTPM
Schmiedel:
6.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.6
HPA sample
nTPM
gdT-cell nTPM: 24.9
Samples: 6
Max nTPM: 34.1
Min nTPM: 19.5
P10809_1007
19.5
P10809_1022
30.7
P10809_1041
34.1
P10809_1060
21.5
P10809_1077
19.8
P10809_1098
23.7
MAIT T-cell nTPM: 23.0
Samples: 6
Max nTPM: 37.8
Min nTPM: 13.5
P10809_1006
13.5
P10809_1024
20.1
P10809_1043
25.8
P10809_1062
22.3
P10809_1083
18.5
P10809_1097
37.8
Memory CD4 T-cell nTPM: 22.7
Samples: 6
Max nTPM: 25.3
Min nTPM: 17.6
P10809_1014
17.6
P10809_1026
20.6
P10809_1045
25.0
P10809_1064
24.7
P10809_1086
25.3
P10809_1113
23.2
Memory CD8 T-cell nTPM: 26.2
Samples: 5
Max nTPM: 31.7
Min nTPM: 19.0
P10809_1012
19.0
P10809_1027
21.1
P10809_1046
31.7
P10809_1065
30.3
P10809_1111
28.9
Naive CD4 T-cell nTPM: 22.3
Samples: 6
Max nTPM: 24.8
Min nTPM: 14.0
P10809_1015
14.0
P10809_1030
23.4
P10809_1049
24.1
P10809_1068
22.9
P10809_1085
24.8
P10809_1112
24.8
Naive CD8 T-cell nTPM: 21.1
Samples: 6
Max nTPM: 23.7
Min nTPM: 13.3
P10809_1016
13.3
P10809_1031
22.5
P10809_1050
22.2
P10809_1069
22.4
P10809_1087
23.7
P10809_1110
22.2
T-reg nTPM: 28.5
Samples: 6
Max nTPM: 39.0
Min nTPM: 20.2
P10809_1018
20.6
P10809_1037
29.9
P10809_1056
39.0
P10809_1075
31.9
P10809_1094
20.2
P10809_1106
29.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.0
Samples: 4
Max nTPM: 9.2
Min nTPM: 8.7
RHH5202_R3573
8.9
RHH5230_R3602
9.2
RHH5259_R3631
8.7
RHH5288_R3660
9.0
Effector memory CD8 T-cell nTPM: 10.2
Samples: 4
Max nTPM: 11.5
Min nTPM: 8.9
RHH5203_R3574
9.9
RHH5231_R3603
11.5
RHH5260_R3632
10.4
RHH5289_R3661
8.9
MAIT T-cell nTPM: 12.2
Samples: 4
Max nTPM: 16.2
Min nTPM: 7.8
RHH5233_R3605
16.2
RHH5205_R3576
10.5
RHH5262_R3634
7.8
RHH5297_R3663
14.3
Memory CD4 T-cell TFH nTPM: 12.9
Samples: 4
Max nTPM: 18.2
Min nTPM: 10.1
RHH5300_R3666
10.1
RHH5236_R3608
18.2
RHH5265_R3637
11.5
RHH5208_R3579
11.6
Memory CD4 T-cell Th1 nTPM: 13.3
Samples: 4
Max nTPM: 14.7
Min nTPM: 9.5
RHH5210_R3581
14.2
RHH5302_R3668
14.6
RHH5238_R3610
14.7
RHH5267_R3639
9.5
Memory CD4 T-cell Th1/Th17 nTPM: 9.1
Samples: 4
Max nTPM: 13.2
Min nTPM: 6.0
RHH5303_R3669
13.2
RHH5211_R3582
9.7
RHH5239_R3611
6.0
RHH5268_R3640
7.5
Memory CD4 T-cell Th17 nTPM: 9.4
Samples: 4
Max nTPM: 12.8
Min nTPM: 5.8
RHH5304_R3670
10.4
RHH5212_R3583
12.8
RHH5240_R3612
8.6
RHH5269_R3641
5.8
Memory CD4 T-cell Th2 nTPM: 11.6
Samples: 4
Max nTPM: 13.4
Min nTPM: 9.4
RHH5305_R3671
12.7
RHH5213_R3584
10.7
RHH5241_R3613
13.4
RHH5270_R3642
9.4
Naive CD4 T-cell nTPM: 9.8
Samples: 4
Max nTPM: 13.1
Min nTPM: 4.4
RHH5306_R3672
11.2
RHH5214_R3585
13.1
RHH5242_R3614
10.4
RHH5271_R3643
4.4
Naive CD8 T-cell nTPM: 6.2
Samples: 4
Max nTPM: 10.1
Min nTPM: 3.6
RHH5201_R3572
4.6
RHH5229_R3601
6.5
RHH5258_R3630
3.6
RHH5287_R3659
10.1
Non-Vd2 gdTCR nTPM: 10.9
Samples: 4
Max nTPM: 13.3
Min nTPM: 6.4
RHH5235_R3607
12.3
RHH5264_R3636
6.4
RHH5207_R3578
11.5
RHH5299_R3665
13.3
T-reg nTPM: 11.6
Samples: 4
Max nTPM: 15.8
Min nTPM: 4.3
RHH5301_R3667
14.6
RHH5237_R3609
15.8
RHH5266_R3638
4.3
RHH5209_R3580
11.6
Terminal effector memory CD4 T-cell nTPM: 12.4
Samples: 2
Max nTPM: 13.1
Min nTPM: 11.7
RHH5243_R3615
13.1
RHH5272_R3644
11.7
Terminal effector memory CD8 T-cell nTPM: 18.1
Samples: 4
Max nTPM: 28.7
Min nTPM: 12.3
RHH5232_R3604
17.3
RHH5204_R3575
28.7
RHH5261_R3633
12.3
RHH5296_R3662
14.2
Vd2 gdTCR nTPM: 15.3
Samples: 4
Max nTPM: 23.5
Min nTPM: 7.9
RHH5234_R3606
13.2
RHH5206_R3577
23.5
RHH5263_R3635
7.9
RHH5298_R3664
16.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
