We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.1
nTPM
Monaco:
48.7
nTPM
Schmiedel:
52.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.1
HPA sample
nTPM
gdT-cell nTPM: 20.9
Samples: 6
Max nTPM: 30.2
Min nTPM: 12.9
P10809_1007
14.8
P10809_1022
13.4
P10809_1041
30.2
P10809_1060
12.9
P10809_1077
25.7
P10809_1098
28.6
MAIT T-cell nTPM: 34.2
Samples: 6
Max nTPM: 48.0
Min nTPM: 15.0
P10809_1006
15.0
P10809_1024
35.4
P10809_1043
48.0
P10809_1062
26.4
P10809_1083
48.0
P10809_1097
32.2
Memory CD4 T-cell nTPM: 14.8
Samples: 6
Max nTPM: 19.8
Min nTPM: 6.4
P10809_1014
6.4
P10809_1026
17.5
P10809_1045
14.4
P10809_1064
19.8
P10809_1086
18.8
P10809_1113
11.7
Memory CD8 T-cell nTPM: 32.9
Samples: 5
Max nTPM: 45.7
Min nTPM: 12.2
P10809_1012
12.2
P10809_1027
37.6
P10809_1046
45.7
P10809_1065
27.1
P10809_1111
42.0
Naive CD4 T-cell nTPM: 9.2
Samples: 6
Max nTPM: 17.3
Min nTPM: 3.1
P10809_1015
3.1
P10809_1030
14.7
P10809_1049
17.3
P10809_1068
6.6
P10809_1085
8.0
P10809_1112
5.3
Naive CD8 T-cell nTPM: 16.8
Samples: 6
Max nTPM: 31.4
Min nTPM: 4.8
P10809_1016
4.8
P10809_1031
14.2
P10809_1050
24.6
P10809_1069
17.9
P10809_1087
31.4
P10809_1110
7.8
T-reg nTPM: 11.9
Samples: 6
Max nTPM: 27.9
Min nTPM: 5.2
P10809_1018
5.2
P10809_1037
9.9
P10809_1056
27.9
P10809_1075
8.7
P10809_1094
8.1
P10809_1106
11.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.4
Samples: 4
Max nTPM: 23.3
Min nTPM: 4.5
RHH5202_R3573
23.3
RHH5230_R3602
16.3
RHH5259_R3631
4.5
RHH5288_R3660
21.5
Effector memory CD8 T-cell nTPM: 32.3
Samples: 4
Max nTPM: 41.8
Min nTPM: 14.0
RHH5203_R3574
37.8
RHH5231_R3603
41.8
RHH5260_R3632
14.0
RHH5289_R3661
35.7
MAIT T-cell nTPM: 48.7
Samples: 4
Max nTPM: 71.1
Min nTPM: 34.6
RHH5233_R3605
71.1
RHH5205_R3576
38.0
RHH5262_R3634
34.6
RHH5297_R3663
51.1
Memory CD4 T-cell TFH nTPM: 6.0
Samples: 4
Max nTPM: 10.7
Min nTPM: 2.1
RHH5300_R3666
10.7
RHH5236_R3608
2.1
RHH5265_R3637
5.1
RHH5208_R3579
6.2
Memory CD4 T-cell Th1 nTPM: 11.0
Samples: 4
Max nTPM: 14.1
Min nTPM: 5.3
RHH5210_R3581
14.1
RHH5302_R3668
10.8
RHH5238_R3610
13.8
RHH5267_R3639
5.3
Memory CD4 T-cell Th1/Th17 nTPM: 9.8
Samples: 4
Max nTPM: 13.9
Min nTPM: 6.6
RHH5303_R3669
13.9
RHH5211_R3582
10.8
RHH5239_R3611
8.0
RHH5268_R3640
6.6
Memory CD4 T-cell Th17 nTPM: 8.0
Samples: 4
Max nTPM: 13.9
Min nTPM: 3.8
RHH5304_R3670
13.9
RHH5212_R3583
9.7
RHH5240_R3612
4.5
RHH5269_R3641
3.8
Memory CD4 T-cell Th2 nTPM: 8.9
Samples: 4
Max nTPM: 11.0
Min nTPM: 7.8
RHH5305_R3671
8.5
RHH5213_R3584
8.3
RHH5241_R3613
11.0
RHH5270_R3642
7.8
Naive CD4 T-cell nTPM: 4.7
Samples: 4
Max nTPM: 6.1
Min nTPM: 2.2
RHH5306_R3672
5.1
RHH5214_R3585
6.1
RHH5242_R3614
2.2
RHH5271_R3643
5.4
Naive CD8 T-cell nTPM: 4.0
Samples: 4
Max nTPM: 8.6
Min nTPM: 0.4
RHH5201_R3572
4.0
RHH5229_R3601
0.4
RHH5258_R3630
8.6
RHH5287_R3659
3.1
Non-Vd2 gdTCR nTPM: 19.4
Samples: 4
Max nTPM: 35.0
Min nTPM: 6.0
RHH5235_R3607
21.2
RHH5264_R3636
6.0
RHH5207_R3578
15.2
RHH5299_R3665
35.0
T-reg nTPM: 7.4
Samples: 4
Max nTPM: 13.3
Min nTPM: 2.5
RHH5301_R3667
13.3
RHH5237_R3609
4.5
RHH5266_R3638
2.5
RHH5209_R3580
9.1
Terminal effector memory CD4 T-cell nTPM: 33.0
Samples: 2
Max nTPM: 42.3
Min nTPM: 23.6
RHH5243_R3615
42.3
RHH5272_R3644
23.6
Terminal effector memory CD8 T-cell nTPM: 25.6
Samples: 4
Max nTPM: 37.7
Min nTPM: 15.5
RHH5232_R3604
22.2
RHH5204_R3575
27.1
RHH5261_R3633
15.5
RHH5296_R3662
37.7
Vd2 gdTCR nTPM: 23.3
Samples: 4
Max nTPM: 32.4
Min nTPM: 11.7
RHH5234_R3606
20.2
RHH5206_R3577
28.8
RHH5263_R3635
11.7
RHH5298_R3664
32.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
