HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:71.7 nTPM
HPA Brain:79.3 nTPM
GTEx:71.7 nTPM
FANTOM5:211.9 Scaled Tags Per Million
Pig:24.6 nTPM
Mouse:138.9 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036591
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.3
Sample id Sample description nTPM
Hippocampus
nTPM: 77.4
1898 Male, age 80, left hemisphere 87.1
2529 Female, age 94, left hemisphere 84.1
1911 Female, age 85, right hemisphere 74.6
2148 Female, age 91, left hemisphere 74.1
1855 Male, age 76, left hemisphere 72.9
2621 Female, age 67, right hemisphere 71.6
Dentate gyrus
nTPM: 72.0
2010 Male, age 76, both hemispheres 82.7
2246 Female, age 85, both hemispheres 74.3
2528 Male, age 74, both hemispheres 72.5
2530 Female, age 94, left hemisphere 69.8
1927 Female, age 91, both hemispheres 68.4
2531 Female, age 67, both hemispheres 64.2
Entorhinal gyrus
nTPM: 69.1
1938 Female, age 85, left hemisphere 80.8
2764 Male, age 80, right hemisphere 80.6
2117 Female, age 91, right hemisphere 78.0
1787 Male, age 76, left hemisphere 68.2
2686 Male, age 75, right hemisphere 56.7
2613 Female, age 94, left hemisphere 50.1
Hippocampus, CA1
nTPM: 79.3
2749 Male, age 80, left hemisphere 103.1
1873 Female, age 85, both hemispheres 84.1
2527 Male, age 74, both hemispheres 70.3
2082 Female, age 91, right hemisphere 69.7
2045 Male, age 76, both hemispheres 69.5
Hippocampus, CA2
nTPM: 75.1
1892 Male, age 76, both hemispheres 89.2
1963 Male, age 80, left hemisphere 78.3
2249 Male, age 74, both hemispheres 76.6
2437 Female, age 94, left hemisphere 72.8
1940 Female, age 85, left hemisphere 70.3
2113 Female, age 91, right hemisphere 63.4
Hippocampus, CA3
nTPM: 77.2
2137 Male, age 80, left hemisphere 94.1
1867 Male, age 76, both hemispheres 87.9
2436 Male, age 74, both hemispheres 82.7
1891 Female, age 85, both hemispheres 79.6
2620 Female, age 94, left hemisphere 61.1
2861 Female, age 67, both hemispheres 57.5
Parahippocampal cortex
nTPM: 70.1
2245 Female, age 91, both hemispheres 86.2
1850 Male, age 80, both hemispheres 80.6
2018 Male, age 76, both hemispheres 76.9
2532 Female, age 72, left hemisphere 72.7
1990 Female, age 91, right hemisphere 71.0
1933 Female, age 85, both hemispheres 69.8
2250 Female, age 67, right hemisphere 69.3
2692 Male, age 74, both hemispheres 63.7
2622 Female, age 67, right hemisphere 59.6
2693 Female, age 94, both hemispheres 51.6
Perirhinal gyrus
nTPM: 75.3
1794 Male, age 80, right hemisphere 78.9
1847 Female, age 91, left hemisphere 78.6
1841 Female, age 85, right hemisphere 77.8
2521 Female, age 94, right hemisphere 73.2
2848 Male, age 76, right hemisphere 67.8
Subiculum
nTPM: 77.1
2438 Female, age 94, left hemisphere 94.4
1901 Male, age 80, both hemispheres 87.0
1977 Female, age 85, both hemispheres 77.2
2042 Male, age 76, both hemispheres 75.2
2619 Male, age 74, both hemispheres 69.2
2729 Female, age 91, right hemisphere 59.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.7
Samples: 197

Max nTPM: 116.8
Min nTPM: 40.3
Std nTPM: 14.9
Median nTPM: 71.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 116.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 116.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 103.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 102.7
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 102.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 100.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 98.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 98.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 97.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 95.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 95.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 211.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 211.9
FF:10169-103B7 60 years, female 250.2
FF:10153-102I9 76 years, female 173.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.6
Pig sample Sample description nTPM
Subiculum
nTPM: 21.9
Samples: 4

Max nTPM: 26.0
Min nTPM: 20.1
Sample A Female 26.0
Sample B Female 20.1
Sample C Male 20.7
Sample D Male 20.9
Dorsal hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 28.5
Min nTPM: 21.1
Sample A Female 28.5
Sample B Female 23.3
Sample C Male 25.6
Sample D Male 21.1
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 21.8
Min nTPM: 17.0
Sample A Female 19.8
Sample B Female 21.8
Sample C Male 20.7
Sample D Male 17.0
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.9
Sample A Female 24.4
Sample B Female 19.9
Sample C Male 21.0
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 127.9
Samples: 4

Max nTPM: 134.8
Min nTPM: 118.2
Sample A Male 125.2
Sample B Male 134.8
Sample C Female 133.4
Sample D Female 118.2
Hippocampal formation
nTPM: 138.9
Samples: 4

Max nTPM: 158.7
Min nTPM: 128.6
Sample A Male 158.7
Sample B Male 131.5
Sample C Female 136.9
Sample D Female 128.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
69352872 Antisense, RP_050412_01_C10, Mouse strain C57BL/6J (56 days, male) 10.8

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