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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4386.2
nTPM
Monaco:
1363.3
nTPM
Schmiedel:
1957.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4386.2
HPA sample
nTPM
gdT-cell nTPM: 1359.6
Samples: 6
Max nTPM: 2017.2
Min nTPM: 1000.3
P10809_1007
2017.2
P10809_1022
1000.3
P10809_1041
1277.1
P10809_1060
1109.5
P10809_1077
1352.9
P10809_1098
1400.4
MAIT T-cell nTPM: 2721.1
Samples: 6
Max nTPM: 3237.8
Min nTPM: 2155.3
P10809_1006
3237.8
P10809_1024
2753.3
P10809_1043
2155.3
P10809_1062
2757.1
P10809_1083
2390.4
P10809_1097
3032.8
Memory CD4 T-cell nTPM: 2914.8
Samples: 6
Max nTPM: 4652.1
Min nTPM: 2190.1
P10809_1014
4652.1
P10809_1026
2996.5
P10809_1045
2427.1
P10809_1064
2201.2
P10809_1086
2190.1
P10809_1113
3021.7
Memory CD8 T-cell nTPM: 2028.3
Samples: 5
Max nTPM: 2812.5
Min nTPM: 1633.9
P10809_1012
2812.5
P10809_1027
1865.5
P10809_1046
1759.4
P10809_1065
1633.9
P10809_1111
2070.0
Naive CD4 T-cell nTPM: 4386.2
Samples: 6
Max nTPM: 7268.5
Min nTPM: 3065.7
P10809_1015
7268.5
P10809_1030
4273.1
P10809_1049
3436.4
P10809_1068
4219.7
P10809_1085
3065.7
P10809_1112
4053.5
Naive CD8 T-cell nTPM: 3377.5
Samples: 6
Max nTPM: 7248.3
Min nTPM: 1500.3
P10809_1016
7248.3
P10809_1031
3216.1
P10809_1050
2523.2
P10809_1069
2444.5
P10809_1087
1500.3
P10809_1110
3332.3
T-reg nTPM: 2180.1
Samples: 6
Max nTPM: 2574.2
Min nTPM: 1885.0
P10809_1018
2574.2
P10809_1037
2192.4
P10809_1056
1885.0
P10809_1075
2189.5
P10809_1094
2059.9
P10809_1106
2179.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1363.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 743.3
Samples: 4
Max nTPM: 1058.6
Min nTPM: 389.8
RHH5202_R3573
389.8
RHH5230_R3602
908.3
RHH5259_R3631
1058.6
RHH5288_R3660
616.3
Effector memory CD8 T-cell nTPM: 288.6
Samples: 4
Max nTPM: 509.7
Min nTPM: 157.5
RHH5203_R3574
242.0
RHH5231_R3603
245.2
RHH5260_R3632
509.7
RHH5289_R3661
157.5
MAIT T-cell nTPM: 643.3
Samples: 4
Max nTPM: 756.1
Min nTPM: 397.1
RHH5233_R3605
397.1
RHH5205_R3576
756.1
RHH5262_R3634
741.1
RHH5297_R3663
678.9
Memory CD4 T-cell TFH nTPM: 563.3
Samples: 4
Max nTPM: 657.4
Min nTPM: 421.3
RHH5300_R3666
635.0
RHH5236_R3608
657.4
RHH5265_R3637
539.3
RHH5208_R3579
421.3
Memory CD4 T-cell Th1 nTPM: 966.3
Samples: 4
Max nTPM: 1444.9
Min nTPM: 407.2
RHH5210_R3581
407.2
RHH5302_R3668
1030.0
RHH5238_R3610
1444.9
RHH5267_R3639
983.2
Memory CD4 T-cell Th1/Th17 nTPM: 734.0
Samples: 4
Max nTPM: 1042.4
Min nTPM: 380.7
RHH5303_R3669
559.6
RHH5211_R3582
380.7
RHH5239_R3611
953.2
RHH5268_R3640
1042.4
Memory CD4 T-cell Th17 nTPM: 794.0
Samples: 4
Max nTPM: 1171.6
Min nTPM: 523.5
RHH5304_R3670
1171.6
RHH5212_R3583
523.5
RHH5240_R3612
730.8
RHH5269_R3641
750.1
Memory CD4 T-cell Th2 nTPM: 839.2
Samples: 4
Max nTPM: 1360.2
Min nTPM: 601.5
RHH5305_R3671
1360.2
RHH5213_R3584
601.5
RHH5241_R3613
626.2
RHH5270_R3642
768.8
Naive CD4 T-cell nTPM: 1363.3
Samples: 4
Max nTPM: 1909.5
Min nTPM: 848.7
RHH5306_R3672
1909.5
RHH5214_R3585
1416.4
RHH5242_R3614
848.7
RHH5271_R3643
1278.6
Naive CD8 T-cell nTPM: 1197.1
Samples: 4
Max nTPM: 1821.4
Min nTPM: 611.3
RHH5201_R3572
611.3
RHH5229_R3601
1821.4
RHH5258_R3630
804.4
RHH5287_R3659
1551.3
Non-Vd2 gdTCR nTPM: 396.1
Samples: 4
Max nTPM: 515.2
Min nTPM: 279.0
RHH5235_R3607
515.2
RHH5264_R3636
279.0
RHH5207_R3578
364.6
RHH5299_R3665
425.7
T-reg nTPM: 731.8
Samples: 4
Max nTPM: 911.9
Min nTPM: 467.2
RHH5301_R3667
839.0
RHH5237_R3609
467.2
RHH5266_R3638
911.9
RHH5209_R3580
709.0
Terminal effector memory CD4 T-cell nTPM: 426.2
Samples: 2
Max nTPM: 474.8
Min nTPM: 377.5
RHH5243_R3615
474.8
RHH5272_R3644
377.5
Terminal effector memory CD8 T-cell nTPM: 462.0
Samples: 4
Max nTPM: 721.4
Min nTPM: 201.8
RHH5232_R3604
201.8
RHH5204_R3575
721.4
RHH5261_R3633
570.4
RHH5296_R3662
354.5
Vd2 gdTCR nTPM: 755.0
Samples: 4
Max nTPM: 1090.5
Min nTPM: 459.0
RHH5234_R3606
459.0
RHH5206_R3577
1090.5
RHH5263_R3635
713.1
RHH5298_R3664
757.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.