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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
351.6
nTPM
Monaco:
185.0
nTPM
Schmiedel:
204.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
351.6
HPA sample
nTPM
gdT-cell nTPM: 193.3
Samples: 6
Max nTPM: 283.2
Min nTPM: 105.4
P10809_1007
105.4
P10809_1022
211.5
P10809_1041
283.2
P10809_1060
186.4
P10809_1077
175.7
P10809_1098
197.6
MAIT T-cell nTPM: 212.2
Samples: 6
Max nTPM: 284.1
Min nTPM: 114.9
P10809_1006
114.9
P10809_1024
232.6
P10809_1043
284.1
P10809_1062
201.4
P10809_1083
166.1
P10809_1097
273.9
Memory CD4 T-cell nTPM: 228.5
Samples: 6
Max nTPM: 314.5
Min nTPM: 129.1
P10809_1014
129.1
P10809_1026
314.5
P10809_1045
270.5
P10809_1064
226.5
P10809_1086
186.3
P10809_1113
243.8
Memory CD8 T-cell nTPM: 227.2
Samples: 5
Max nTPM: 307.6
Min nTPM: 149.8
P10809_1012
149.8
P10809_1027
213.9
P10809_1046
251.5
P10809_1065
213.0
P10809_1111
307.6
Naive CD4 T-cell nTPM: 203.5
Samples: 6
Max nTPM: 306.6
Min nTPM: 97.0
P10809_1015
97.0
P10809_1030
227.2
P10809_1049
306.6
P10809_1068
188.7
P10809_1085
207.0
P10809_1112
194.4
Naive CD8 T-cell nTPM: 194.9
Samples: 6
Max nTPM: 288.5
Min nTPM: 117.6
P10809_1016
117.6
P10809_1031
288.5
P10809_1050
199.8
P10809_1069
193.3
P10809_1087
171.9
P10809_1110
198.2
T-reg nTPM: 351.6
Samples: 6
Max nTPM: 567.2
Min nTPM: 181.8
P10809_1018
181.8
P10809_1037
338.2
P10809_1056
567.2
P10809_1075
324.3
P10809_1094
296.8
P10809_1106
401.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 138.2
Samples: 4
Max nTPM: 196.8
Min nTPM: 100.2
RHH5202_R3573
147.7
RHH5230_R3602
108.2
RHH5259_R3631
100.2
RHH5288_R3660
196.8
Effector memory CD8 T-cell nTPM: 150.3
Samples: 4
Max nTPM: 200.4
Min nTPM: 110.9
RHH5203_R3574
200.4
RHH5231_R3603
153.9
RHH5260_R3632
110.9
RHH5289_R3661
136.1
MAIT T-cell nTPM: 161.6
Samples: 4
Max nTPM: 232.8
Min nTPM: 111.7
RHH5233_R3605
144.3
RHH5205_R3576
111.7
RHH5262_R3634
157.7
RHH5297_R3663
232.8
Memory CD4 T-cell TFH nTPM: 185.0
Samples: 4
Max nTPM: 197.8
Min nTPM: 163.4
RHH5300_R3666
197.8
RHH5236_R3608
191.5
RHH5265_R3637
163.4
RHH5208_R3579
187.1
Memory CD4 T-cell Th1 nTPM: 144.8
Samples: 4
Max nTPM: 214.5
Min nTPM: 93.9
RHH5210_R3581
161.5
RHH5302_R3668
214.5
RHH5238_R3610
93.9
RHH5267_R3639
109.1
Memory CD4 T-cell Th1/Th17 nTPM: 150.7
Samples: 4
Max nTPM: 234.6
Min nTPM: 59.7
RHH5303_R3669
234.6
RHH5211_R3582
196.8
RHH5239_R3611
59.7
RHH5268_R3640
111.8
Memory CD4 T-cell Th17 nTPM: 130.2
Samples: 4
Max nTPM: 201.5
Min nTPM: 89.1
RHH5304_R3670
132.6
RHH5212_R3583
201.5
RHH5240_R3612
89.1
RHH5269_R3641
97.4
Memory CD4 T-cell Th2 nTPM: 148.6
Samples: 4
Max nTPM: 182.8
Min nTPM: 120.3
RHH5305_R3671
144.4
RHH5213_R3584
146.9
RHH5241_R3613
182.8
RHH5270_R3642
120.3
Naive CD4 T-cell nTPM: 153.2
Samples: 4
Max nTPM: 199.4
Min nTPM: 111.6
RHH5306_R3672
199.4
RHH5214_R3585
188.9
RHH5242_R3614
112.7
RHH5271_R3643
111.6
Naive CD8 T-cell nTPM: 136.3
Samples: 4
Max nTPM: 190.9
Min nTPM: 61.6
RHH5201_R3572
144.6
RHH5229_R3601
61.6
RHH5258_R3630
190.9
RHH5287_R3659
148.1
Non-Vd2 gdTCR nTPM: 156.2
Samples: 4
Max nTPM: 208.0
Min nTPM: 101.8
RHH5235_R3607
101.8
RHH5264_R3636
208.0
RHH5207_R3578
118.9
RHH5299_R3665
196.1
T-reg nTPM: 168.1
Samples: 4
Max nTPM: 216.1
Min nTPM: 111.8
RHH5301_R3667
216.1
RHH5237_R3609
215.2
RHH5266_R3638
111.8
RHH5209_R3580
129.1
Terminal effector memory CD4 T-cell nTPM: 115.0
Samples: 2
Max nTPM: 149.2
Min nTPM: 80.7
RHH5243_R3615
80.7
RHH5272_R3644
149.2
Terminal effector memory CD8 T-cell nTPM: 166.9
Samples: 4
Max nTPM: 207.3
Min nTPM: 114.1
RHH5232_R3604
160.4
RHH5204_R3575
185.6
RHH5261_R3633
114.1
RHH5296_R3662
207.3
Vd2 gdTCR nTPM: 160.6
Samples: 4
Max nTPM: 188.5
Min nTPM: 111.1
RHH5234_R3606
158.8
RHH5206_R3577
188.5
RHH5263_R3635
111.1
RHH5298_R3664
183.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
