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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
202.9
nTPM
Monaco:
65.5
nTPM
Schmiedel:
30.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
202.9
HPA sample
nTPM
gdT-cell nTPM: 183.0
Samples: 6
Max nTPM: 231.2
Min nTPM: 148.2
P10809_1007
148.2
P10809_1022
223.2
P10809_1041
231.2
P10809_1060
153.9
P10809_1077
155.7
P10809_1098
185.9
MAIT T-cell nTPM: 170.6
Samples: 6
Max nTPM: 224.1
Min nTPM: 103.7
P10809_1006
103.7
P10809_1024
181.8
P10809_1043
201.5
P10809_1062
170.6
P10809_1083
142.0
P10809_1097
224.1
Memory CD4 T-cell nTPM: 155.2
Samples: 6
Max nTPM: 190.2
Min nTPM: 121.8
P10809_1014
121.8
P10809_1026
190.2
P10809_1045
145.4
P10809_1064
151.4
P10809_1086
136.6
P10809_1113
185.7
Memory CD8 T-cell nTPM: 165.6
Samples: 5
Max nTPM: 196.2
Min nTPM: 132.2
P10809_1012
132.2
P10809_1027
196.2
P10809_1046
170.2
P10809_1065
158.5
P10809_1111
171.0
Naive CD4 T-cell nTPM: 146.8
Samples: 6
Max nTPM: 199.8
Min nTPM: 98.4
P10809_1015
98.4
P10809_1030
132.9
P10809_1049
199.8
P10809_1068
145.0
P10809_1085
142.6
P10809_1112
161.9
Naive CD8 T-cell nTPM: 164.8
Samples: 6
Max nTPM: 193.9
Min nTPM: 124.7
P10809_1016
124.7
P10809_1031
193.9
P10809_1050
167.2
P10809_1069
182.9
P10809_1087
148.3
P10809_1110
171.8
T-reg nTPM: 202.8
Samples: 6
Max nTPM: 280.3
Min nTPM: 139.9
P10809_1018
166.1
P10809_1037
139.9
P10809_1056
280.3
P10809_1075
200.5
P10809_1094
227.2
P10809_1106
203.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.7
Samples: 4
Max nTPM: 67.7
Min nTPM: 37.5
RHH5202_R3573
37.5
RHH5230_R3602
55.8
RHH5259_R3631
41.6
RHH5288_R3660
67.7
Effector memory CD8 T-cell nTPM: 39.1
Samples: 4
Max nTPM: 47.2
Min nTPM: 33.1
RHH5203_R3574
33.1
RHH5231_R3603
40.0
RHH5260_R3632
47.2
RHH5289_R3661
35.9
MAIT T-cell nTPM: 49.9
Samples: 4
Max nTPM: 67.1
Min nTPM: 31.7
RHH5233_R3605
31.7
RHH5205_R3576
41.0
RHH5262_R3634
67.1
RHH5297_R3663
59.6
Memory CD4 T-cell TFH nTPM: 57.1
Samples: 4
Max nTPM: 68.9
Min nTPM: 33.9
RHH5300_R3666
61.8
RHH5236_R3608
68.9
RHH5265_R3637
33.9
RHH5208_R3579
63.6
Memory CD4 T-cell Th1 nTPM: 57.6
Samples: 4
Max nTPM: 83.2
Min nTPM: 40.8
RHH5210_R3581
40.8
RHH5302_R3668
83.2
RHH5238_R3610
56.7
RHH5267_R3639
49.8
Memory CD4 T-cell Th1/Th17 nTPM: 50.4
Samples: 4
Max nTPM: 68.7
Min nTPM: 41.3
RHH5303_R3669
68.7
RHH5211_R3582
47.3
RHH5239_R3611
44.3
RHH5268_R3640
41.3
Memory CD4 T-cell Th17 nTPM: 42.7
Samples: 4
Max nTPM: 51.2
Min nTPM: 27.8
RHH5304_R3670
51.2
RHH5212_R3583
51.2
RHH5240_R3612
40.4
RHH5269_R3641
27.8
Memory CD4 T-cell Th2 nTPM: 40.9
Samples: 4
Max nTPM: 55.0
Min nTPM: 30.6
RHH5305_R3671
55.0
RHH5213_R3584
30.6
RHH5241_R3613
37.3
RHH5270_R3642
40.5
Naive CD4 T-cell nTPM: 53.5
Samples: 4
Max nTPM: 81.7
Min nTPM: 32.8
RHH5306_R3672
62.5
RHH5214_R3585
81.7
RHH5242_R3614
37.1
RHH5271_R3643
32.8
Naive CD8 T-cell nTPM: 45.0
Samples: 4
Max nTPM: 50.1
Min nTPM: 37.9
RHH5201_R3572
37.9
RHH5229_R3601
50.1
RHH5258_R3630
42.2
RHH5287_R3659
49.6
Non-Vd2 gdTCR nTPM: 54.8
Samples: 4
Max nTPM: 80.0
Min nTPM: 35.4
RHH5235_R3607
35.4
RHH5264_R3636
53.6
RHH5207_R3578
50.0
RHH5299_R3665
80.0
T-reg nTPM: 42.4
Samples: 4
Max nTPM: 51.6
Min nTPM: 39.1
RHH5301_R3667
51.6
RHH5237_R3609
39.1
RHH5266_R3638
39.7
RHH5209_R3580
39.3
Terminal effector memory CD4 T-cell nTPM: 33.1
Samples: 2
Max nTPM: 33.4
Min nTPM: 32.8
RHH5243_R3615
33.4
RHH5272_R3644
32.8
Terminal effector memory CD8 T-cell nTPM: 63.8
Samples: 4
Max nTPM: 108.1
Min nTPM: 36.4
RHH5232_R3604
36.4
RHH5204_R3575
108.1
RHH5261_R3633
43.9
RHH5296_R3662
66.9
Vd2 gdTCR nTPM: 65.5
Samples: 4
Max nTPM: 100.3
Min nTPM: 38.9
RHH5234_R3606
39.9
RHH5206_R3577
100.3
RHH5263_R3635
38.9
RHH5298_R3664
82.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
