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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
17.1
nTPM
Monaco:
165.7
nTPM
Schmiedel:
185.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.1
HPA sample
nTPM
gdT-cell nTPM: 15.8
Samples: 6
Max nTPM: 20.9
Min nTPM: 6.5
P10809_1007
19.5
P10809_1022
20.9
P10809_1041
7.8
P10809_1060
6.5
P10809_1077
20.6
P10809_1098
19.6
MAIT T-cell nTPM: 12.8
Samples: 6
Max nTPM: 23.0
Min nTPM: 4.1
P10809_1006
23.0
P10809_1024
4.1
P10809_1043
18.6
P10809_1062
6.1
P10809_1083
7.7
P10809_1097
17.0
Memory CD4 T-cell nTPM: 11.7
Samples: 6
Max nTPM: 16.2
Min nTPM: 6.2
P10809_1014
16.2
P10809_1026
11.4
P10809_1045
13.1
P10809_1064
14.2
P10809_1086
9.1
P10809_1113
6.2
Memory CD8 T-cell nTPM: 17.1
Samples: 5
Max nTPM: 24.2
Min nTPM: 12.4
P10809_1012
24.2
P10809_1027
13.6
P10809_1046
18.6
P10809_1065
16.5
P10809_1111
12.4
Naive CD4 T-cell nTPM: 6.7
Samples: 6
Max nTPM: 9.6
Min nTPM: 3.2
P10809_1015
7.3
P10809_1030
3.2
P10809_1049
6.7
P10809_1068
4.8
P10809_1085
9.6
P10809_1112
8.5
Naive CD8 T-cell nTPM: 7.4
Samples: 6
Max nTPM: 12.1
Min nTPM: 3.8
P10809_1016
7.3
P10809_1031
9.1
P10809_1050
6.0
P10809_1069
12.1
P10809_1087
3.8
P10809_1110
6.3
T-reg nTPM: 12.1
Samples: 6
Max nTPM: 21.0
Min nTPM: 2.2
P10809_1018
17.3
P10809_1037
13.3
P10809_1056
9.1
P10809_1075
21.0
P10809_1094
2.2
P10809_1106
9.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
165.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 110.5
Samples: 4
Max nTPM: 171.9
Min nTPM: 37.9
RHH5202_R3573
37.9
RHH5230_R3602
171.9
RHH5259_R3631
169.9
RHH5288_R3660
62.3
Effector memory CD8 T-cell nTPM: 128.2
Samples: 4
Max nTPM: 222.6
Min nTPM: 22.1
RHH5203_R3574
61.3
RHH5231_R3603
222.6
RHH5260_R3632
206.7
RHH5289_R3661
22.1
MAIT T-cell nTPM: 95.1
Samples: 4
Max nTPM: 146.6
Min nTPM: 53.8
RHH5233_R3605
53.8
RHH5205_R3576
111.3
RHH5262_R3634
146.6
RHH5297_R3663
68.7
Memory CD4 T-cell TFH nTPM: 105.4
Samples: 4
Max nTPM: 179.0
Min nTPM: 18.1
RHH5300_R3666
179.0
RHH5236_R3608
130.0
RHH5265_R3637
94.5
RHH5208_R3579
18.1
Memory CD4 T-cell Th1 nTPM: 138.6
Samples: 4
Max nTPM: 239.8
Min nTPM: 60.0
RHH5210_R3581
74.1
RHH5302_R3668
60.0
RHH5238_R3610
239.8
RHH5267_R3639
180.4
Memory CD4 T-cell Th1/Th17 nTPM: 143.6
Samples: 4
Max nTPM: 198.4
Min nTPM: 27.0
RHH5303_R3669
27.0
RHH5211_R3582
198.4
RHH5239_R3611
187.8
RHH5268_R3640
161.1
Memory CD4 T-cell Th17 nTPM: 118.5
Samples: 4
Max nTPM: 205.3
Min nTPM: 39.1
RHH5304_R3670
39.1
RHH5212_R3583
205.3
RHH5240_R3612
85.0
RHH5269_R3641
144.4
Memory CD4 T-cell Th2 nTPM: 148.3
Samples: 4
Max nTPM: 210.7
Min nTPM: 40.0
RHH5305_R3671
148.2
RHH5213_R3584
210.7
RHH5241_R3613
40.0
RHH5270_R3642
194.3
Naive CD4 T-cell nTPM: 101.5
Samples: 4
Max nTPM: 118.2
Min nTPM: 81.0
RHH5306_R3672
118.2
RHH5214_R3585
97.0
RHH5242_R3614
81.0
RHH5271_R3643
109.9
Naive CD8 T-cell nTPM: 62.2
Samples: 4
Max nTPM: 100.9
Min nTPM: 12.9
RHH5201_R3572
12.9
RHH5229_R3601
100.9
RHH5258_R3630
82.5
RHH5287_R3659
52.5
Non-Vd2 gdTCR nTPM: 154.1
Samples: 4
Max nTPM: 266.6
Min nTPM: 36.6
RHH5235_R3607
229.3
RHH5264_R3636
83.9
RHH5207_R3578
36.6
RHH5299_R3665
266.6
T-reg nTPM: 151.0
Samples: 4
Max nTPM: 160.4
Min nTPM: 145.5
RHH5301_R3667
146.1
RHH5237_R3609
160.4
RHH5266_R3638
145.5
RHH5209_R3580
151.8
Terminal effector memory CD4 T-cell nTPM: 165.7
Samples: 2
Max nTPM: 225.6
Min nTPM: 105.8
RHH5243_R3615
225.6
RHH5272_R3644
105.8
Terminal effector memory CD8 T-cell nTPM: 125.8
Samples: 4
Max nTPM: 269.2
Min nTPM: 47.5
RHH5232_R3604
86.7
RHH5204_R3575
99.7
RHH5261_R3633
269.2
RHH5296_R3662
47.5
Vd2 gdTCR nTPM: 140.1
Samples: 4
Max nTPM: 177.0
Min nTPM: 103.7
RHH5234_R3606
113.8
RHH5206_R3577
103.7
RHH5263_R3635
177.0
RHH5298_R3664
166.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
