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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
48.3
nTPM
Monaco:
21.2
nTPM
Schmiedel:
4.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.3
HPA sample
nTPM
gdT-cell nTPM: 34.1
Samples: 6
Max nTPM: 51.7
Min nTPM: 19.2
P10809_1007
19.2
P10809_1022
36.5
P10809_1041
51.7
P10809_1060
32.7
P10809_1077
21.0
P10809_1098
43.2
MAIT T-cell nTPM: 27.5
Samples: 6
Max nTPM: 50.4
Min nTPM: 9.9
P10809_1006
9.9
P10809_1024
21.8
P10809_1043
50.4
P10809_1062
32.2
P10809_1083
22.2
P10809_1097
28.2
Memory CD4 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 56.5
Min nTPM: 16.9
P10809_1014
16.9
P10809_1026
56.5
P10809_1045
30.4
P10809_1064
33.1
P10809_1086
19.6
P10809_1113
39.9
Memory CD8 T-cell nTPM: 31.0
Samples: 5
Max nTPM: 41.5
Min nTPM: 20.4
P10809_1012
20.4
P10809_1027
32.1
P10809_1046
41.5
P10809_1065
29.7
P10809_1111
31.4
Naive CD4 T-cell nTPM: 25.1
Samples: 6
Max nTPM: 43.5
Min nTPM: 4.2
P10809_1015
4.2
P10809_1030
25.6
P10809_1049
43.5
P10809_1068
24.3
P10809_1085
18.3
P10809_1112
34.7
Naive CD8 T-cell nTPM: 21.3
Samples: 6
Max nTPM: 32.6
Min nTPM: 13.1
P10809_1016
13.1
P10809_1031
20.1
P10809_1050
21.0
P10809_1069
23.8
P10809_1087
17.0
P10809_1110
32.6
T-reg nTPM: 48.3
Samples: 6
Max nTPM: 113.5
Min nTPM: 20.7
P10809_1018
20.7
P10809_1037
21.4
P10809_1056
113.5
P10809_1075
43.8
P10809_1094
46.2
P10809_1106
44.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 15.5
Min nTPM: 9.2
RHH5202_R3573
9.2
RHH5230_R3602
12.7
RHH5259_R3631
10.3
RHH5288_R3660
15.5
Effector memory CD8 T-cell nTPM: 13.7
Samples: 4
Max nTPM: 20.5
Min nTPM: 9.2
RHH5203_R3574
11.7
RHH5231_R3603
20.5
RHH5260_R3632
9.2
RHH5289_R3661
13.2
MAIT T-cell nTPM: 16.9
Samples: 4
Max nTPM: 20.7
Min nTPM: 11.7
RHH5233_R3605
11.7
RHH5205_R3576
20.7
RHH5262_R3634
15.6
RHH5297_R3663
19.5
Memory CD4 T-cell TFH nTPM: 7.6
Samples: 4
Max nTPM: 9.3
Min nTPM: 4.6
RHH5300_R3666
4.6
RHH5236_R3608
9.3
RHH5265_R3637
7.0
RHH5208_R3579
9.3
Memory CD4 T-cell Th1 nTPM: 10.9
Samples: 4
Max nTPM: 13.4
Min nTPM: 3.7
RHH5210_R3581
13.1
RHH5302_R3668
13.4
RHH5238_R3610
3.7
RHH5267_R3639
13.4
Memory CD4 T-cell Th1/Th17 nTPM: 10.5
Samples: 4
Max nTPM: 16.2
Min nTPM: 5.0
RHH5303_R3669
9.2
RHH5211_R3582
16.2
RHH5239_R3611
5.0
RHH5268_R3640
11.6
Memory CD4 T-cell Th17 nTPM: 14.4
Samples: 4
Max nTPM: 20.8
Min nTPM: 10.1
RHH5304_R3670
10.1
RHH5212_R3583
20.8
RHH5240_R3612
11.9
RHH5269_R3641
14.8
Memory CD4 T-cell Th2 nTPM: 16.1
Samples: 4
Max nTPM: 17.6
Min nTPM: 12.9
RHH5305_R3671
17.2
RHH5213_R3584
12.9
RHH5241_R3613
17.6
RHH5270_R3642
16.5
Naive CD4 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 21.7
Min nTPM: 3.2
RHH5306_R3672
3.2
RHH5214_R3585
12.7
RHH5242_R3614
13.0
RHH5271_R3643
21.7
Naive CD8 T-cell nTPM: 11.6
Samples: 4
Max nTPM: 20.5
Min nTPM: 7.1
RHH5201_R3572
10.4
RHH5229_R3601
7.1
RHH5258_R3630
8.4
RHH5287_R3659
20.5
Non-Vd2 gdTCR nTPM: 15.6
Samples: 4
Max nTPM: 22.1
Min nTPM: 6.2
RHH5235_R3607
15.0
RHH5264_R3636
22.1
RHH5207_R3578
19.2
RHH5299_R3665
6.2
T-reg nTPM: 10.1
Samples: 4
Max nTPM: 13.9
Min nTPM: 7.2
RHH5301_R3667
7.2
RHH5237_R3609
9.0
RHH5266_R3638
13.9
RHH5209_R3580
10.2
Terminal effector memory CD4 T-cell nTPM: 21.2
Samples: 2
Max nTPM: 23.6
Min nTPM: 18.7
RHH5243_R3615
23.6
RHH5272_R3644
18.7
Terminal effector memory CD8 T-cell nTPM: 13.0
Samples: 4
Max nTPM: 14.4
Min nTPM: 11.4
RHH5232_R3604
11.4
RHH5204_R3575
14.4
RHH5261_R3633
14.3
RHH5296_R3662
12.0
Vd2 gdTCR nTPM: 12.2
Samples: 4
Max nTPM: 15.9
Min nTPM: 7.3
RHH5234_R3606
12.8
RHH5206_R3577
12.6
RHH5263_R3635
7.3
RHH5298_R3664
15.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
