We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.8
nTPM
Monaco:
1920.7
nTPM
Schmiedel:
6698.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.8
HPA sample
nTPM
gdT-cell nTPM: 22.9
Samples: 6
Max nTPM: 32.6
Min nTPM: 18.3
P10809_1007
32.6
P10809_1022
18.3
P10809_1041
18.4
P10809_1060
24.3
P10809_1077
19.5
P10809_1098
24.4
MAIT T-cell nTPM: 30.8
Samples: 6
Max nTPM: 46.7
Min nTPM: 20.7
P10809_1006
46.7
P10809_1024
20.7
P10809_1043
24.1
P10809_1062
24.5
P10809_1083
32.9
P10809_1097
35.9
Memory CD4 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 23.3
Min nTPM: 7.3
P10809_1014
23.3
P10809_1026
9.3
P10809_1045
7.3
P10809_1064
15.6
P10809_1086
16.9
P10809_1113
15.2
Memory CD8 T-cell nTPM: 16.9
Samples: 5
Max nTPM: 26.3
Min nTPM: 11.8
P10809_1012
26.3
P10809_1027
15.1
P10809_1046
11.8
P10809_1065
12.3
P10809_1111
18.8
Naive CD4 T-cell nTPM: 20.7
Samples: 6
Max nTPM: 32.0
Min nTPM: 8.8
P10809_1015
32.0
P10809_1030
17.0
P10809_1049
8.8
P10809_1068
24.9
P10809_1085
22.6
P10809_1112
18.8
Naive CD8 T-cell nTPM: 15.6
Samples: 6
Max nTPM: 25.4
Min nTPM: 9.4
P10809_1016
25.4
P10809_1031
9.4
P10809_1050
10.6
P10809_1069
16.8
P10809_1087
19.2
P10809_1110
12.4
T-reg nTPM: 7.9
Samples: 6
Max nTPM: 12.1
Min nTPM: 2.4
P10809_1018
12.1
P10809_1037
2.4
P10809_1056
6.7
P10809_1075
9.1
P10809_1094
11.0
P10809_1106
5.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1920.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1434.1
Samples: 4
Max nTPM: 2284.9
Min nTPM: 965.2
RHH5202_R3573
2284.9
RHH5230_R3602
1230.1
RHH5259_R3631
965.2
RHH5288_R3660
1256.2
Effector memory CD8 T-cell nTPM: 1170.7
Samples: 4
Max nTPM: 1982.7
Min nTPM: 724.1
RHH5203_R3574
1982.7
RHH5231_R3603
973.8
RHH5260_R3632
724.1
RHH5289_R3661
1002.2
MAIT T-cell nTPM: 1920.7
Samples: 4
Max nTPM: 3940.6
Min nTPM: 1038.9
RHH5233_R3605
1564.5
RHH5205_R3576
3940.6
RHH5262_R3634
1138.8
RHH5297_R3663
1038.9
Memory CD4 T-cell TFH nTPM: 1313.8
Samples: 4
Max nTPM: 2193.2
Min nTPM: 890.5
RHH5300_R3666
908.1
RHH5236_R3608
1263.3
RHH5265_R3637
890.5
RHH5208_R3579
2193.2
Memory CD4 T-cell Th1 nTPM: 1108.8
Samples: 4
Max nTPM: 1741.3
Min nTPM: 777.8
RHH5210_R3581
1741.3
RHH5302_R3668
1037.0
RHH5238_R3610
777.8
RHH5267_R3639
879.1
Memory CD4 T-cell Th1/Th17 nTPM: 1380.7
Samples: 4
Max nTPM: 2594.7
Min nTPM: 859.1
RHH5303_R3669
1188.0
RHH5211_R3582
2594.7
RHH5239_R3611
881.1
RHH5268_R3640
859.1
Memory CD4 T-cell Th17 nTPM: 1214.4
Samples: 4
Max nTPM: 1789.7
Min nTPM: 802.5
RHH5304_R3670
1128.1
RHH5212_R3583
1789.7
RHH5240_R3612
1137.1
RHH5269_R3641
802.5
Memory CD4 T-cell Th2 nTPM: 1480.9
Samples: 4
Max nTPM: 2177.3
Min nTPM: 1066.6
RHH5305_R3671
1301.8
RHH5213_R3584
2177.3
RHH5241_R3613
1377.8
RHH5270_R3642
1066.6
Naive CD4 T-cell nTPM: 979.7
Samples: 4
Max nTPM: 1665.6
Min nTPM: 706.1
RHH5306_R3672
706.1
RHH5214_R3585
1665.6
RHH5242_R3614
838.6
RHH5271_R3643
708.3
Naive CD8 T-cell nTPM: 731.5
Samples: 4
Max nTPM: 1290.6
Min nTPM: 490.7
RHH5201_R3572
1290.6
RHH5229_R3601
490.7
RHH5258_R3630
503.6
RHH5287_R3659
641.1
Non-Vd2 gdTCR nTPM: 765.8
Samples: 4
Max nTPM: 1267.2
Min nTPM: 511.0
RHH5235_R3607
654.1
RHH5264_R3636
631.0
RHH5207_R3578
1267.2
RHH5299_R3665
511.0
T-reg nTPM: 1098.1
Samples: 4
Max nTPM: 1637.5
Min nTPM: 728.9
RHH5301_R3667
886.9
RHH5237_R3609
1139.0
RHH5266_R3638
728.9
RHH5209_R3580
1637.5
Terminal effector memory CD4 T-cell nTPM: 439.6
Samples: 2
Max nTPM: 477.1
Min nTPM: 402.0
RHH5243_R3615
402.0
RHH5272_R3644
477.1
Terminal effector memory CD8 T-cell nTPM: 732.0
Samples: 4
Max nTPM: 1153.3
Min nTPM: 447.1
RHH5232_R3604
724.2
RHH5204_R3575
1153.3
RHH5261_R3633
447.1
RHH5296_R3662
603.5
Vd2 gdTCR nTPM: 1133.0
Samples: 4
Max nTPM: 1558.6
Min nTPM: 846.7
RHH5234_R3606
1252.8
RHH5206_R3577
1558.6
RHH5263_R3635
846.7
RHH5298_R3664
874.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
