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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.7
nTPM
Monaco:
169.3
nTPM
Schmiedel:
213.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.7
HPA sample
nTPM
gdT-cell nTPM: 68.4
Samples: 6
Max nTPM: 82.5
Min nTPM: 49.9
P10809_1007
49.9
P10809_1022
58.4
P10809_1041
72.7
P10809_1060
74.0
P10809_1077
82.5
P10809_1098
72.7
MAIT T-cell nTPM: 55.6
Samples: 6
Max nTPM: 73.7
Min nTPM: 37.0
P10809_1006
37.0
P10809_1024
49.6
P10809_1043
47.4
P10809_1062
54.4
P10809_1083
73.7
P10809_1097
71.2
Memory CD4 T-cell nTPM: 42.5
Samples: 6
Max nTPM: 59.0
Min nTPM: 32.6
P10809_1014
32.6
P10809_1026
36.7
P10809_1045
33.1
P10809_1064
59.0
P10809_1086
57.8
P10809_1113
35.7
Memory CD8 T-cell nTPM: 69.7
Samples: 5
Max nTPM: 93.4
Min nTPM: 41.2
P10809_1012
41.2
P10809_1027
74.7
P10809_1046
61.1
P10809_1065
93.4
P10809_1111
78.0
Naive CD4 T-cell nTPM: 40.3
Samples: 6
Max nTPM: 60.0
Min nTPM: 30.5
P10809_1015
37.4
P10809_1030
35.3
P10809_1049
30.5
P10809_1068
42.9
P10809_1085
60.0
P10809_1112
35.9
Naive CD8 T-cell nTPM: 62.4
Samples: 6
Max nTPM: 111.1
Min nTPM: 35.6
P10809_1016
35.6
P10809_1031
44.0
P10809_1050
56.1
P10809_1069
82.3
P10809_1087
111.1
P10809_1110
45.4
T-reg nTPM: 36.1
Samples: 6
Max nTPM: 49.2
Min nTPM: 23.7
P10809_1018
23.7
P10809_1037
49.2
P10809_1056
29.8
P10809_1075
38.8
P10809_1094
46.2
P10809_1106
29.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.9
Samples: 4
Max nTPM: 147.6
Min nTPM: 67.3
RHH5202_R3573
147.6
RHH5230_R3602
67.3
RHH5259_R3631
96.9
RHH5288_R3660
99.8
Effector memory CD8 T-cell nTPM: 153.0
Samples: 4
Max nTPM: 200.7
Min nTPM: 106.3
RHH5203_R3574
200.7
RHH5231_R3603
164.5
RHH5260_R3632
106.3
RHH5289_R3661
140.3
MAIT T-cell nTPM: 109.2
Samples: 4
Max nTPM: 114.1
Min nTPM: 103.4
RHH5233_R3605
105.2
RHH5205_R3576
114.1
RHH5262_R3634
113.9
RHH5297_R3663
103.4
Memory CD4 T-cell TFH nTPM: 103.3
Samples: 4
Max nTPM: 157.5
Min nTPM: 71.4
RHH5300_R3666
71.4
RHH5236_R3608
91.4
RHH5265_R3637
92.7
RHH5208_R3579
157.5
Memory CD4 T-cell Th1 nTPM: 106.8
Samples: 4
Max nTPM: 141.6
Min nTPM: 86.6
RHH5210_R3581
141.6
RHH5302_R3668
92.5
RHH5238_R3610
86.6
RHH5267_R3639
106.3
Memory CD4 T-cell Th1/Th17 nTPM: 108.3
Samples: 4
Max nTPM: 143.1
Min nTPM: 86.6
RHH5303_R3669
108.2
RHH5211_R3582
143.1
RHH5239_R3611
95.3
RHH5268_R3640
86.6
Memory CD4 T-cell Th17 nTPM: 100.4
Samples: 4
Max nTPM: 110.8
Min nTPM: 80.2
RHH5304_R3670
101.0
RHH5212_R3583
109.4
RHH5240_R3612
110.8
RHH5269_R3641
80.2
Memory CD4 T-cell Th2 nTPM: 72.9
Samples: 4
Max nTPM: 98.5
Min nTPM: 59.9
RHH5305_R3671
63.9
RHH5213_R3584
98.5
RHH5241_R3613
69.4
RHH5270_R3642
59.9
Naive CD4 T-cell nTPM: 116.4
Samples: 4
Max nTPM: 171.7
Min nTPM: 84.4
RHH5306_R3672
84.4
RHH5214_R3585
171.7
RHH5242_R3614
113.6
RHH5271_R3643
96.0
Naive CD8 T-cell nTPM: 106.0
Samples: 4
Max nTPM: 163.6
Min nTPM: 75.1
RHH5201_R3572
163.6
RHH5229_R3601
75.1
RHH5258_R3630
88.7
RHH5287_R3659
96.5
Non-Vd2 gdTCR nTPM: 148.4
Samples: 4
Max nTPM: 199.4
Min nTPM: 96.4
RHH5235_R3607
146.0
RHH5264_R3636
151.8
RHH5207_R3578
199.4
RHH5299_R3665
96.4
T-reg nTPM: 90.5
Samples: 4
Max nTPM: 123.4
Min nTPM: 61.7
RHH5301_R3667
61.7
RHH5237_R3609
107.5
RHH5266_R3638
69.2
RHH5209_R3580
123.4
Terminal effector memory CD4 T-cell nTPM: 169.4
Samples: 2
Max nTPM: 170.6
Min nTPM: 168.1
RHH5243_R3615
170.6
RHH5272_R3644
168.1
Terminal effector memory CD8 T-cell nTPM: 153.8
Samples: 4
Max nTPM: 218.8
Min nTPM: 100.8
RHH5232_R3604
160.3
RHH5204_R3575
218.8
RHH5261_R3633
100.8
RHH5296_R3662
135.3
Vd2 gdTCR nTPM: 123.6
Samples: 4
Max nTPM: 186.8
Min nTPM: 88.1
RHH5234_R3606
116.9
RHH5206_R3577
186.8
RHH5263_R3635
88.1
RHH5298_R3664
102.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
