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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
663.9
nTPM
Monaco:
1085.8
nTPM
Schmiedel:
747.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
663.9
HPA sample
nTPM
gdT-cell nTPM: 420.1
Samples: 6
Max nTPM: 515.0
Min nTPM: 336.6
P10809_1007
374.9
P10809_1022
515.0
P10809_1041
483.1
P10809_1060
459.9
P10809_1077
336.6
P10809_1098
351.1
MAIT T-cell nTPM: 345.0
Samples: 6
Max nTPM: 398.9
Min nTPM: 286.9
P10809_1006
317.4
P10809_1024
354.3
P10809_1043
386.2
P10809_1062
398.9
P10809_1083
286.9
P10809_1097
326.0
Memory CD4 T-cell nTPM: 397.7
Samples: 6
Max nTPM: 438.6
Min nTPM: 358.0
P10809_1014
367.5
P10809_1026
424.3
P10809_1045
402.7
P10809_1064
438.6
P10809_1086
358.0
P10809_1113
395.1
Memory CD8 T-cell nTPM: 362.8
Samples: 5
Max nTPM: 411.9
Min nTPM: 288.8
P10809_1012
367.1
P10809_1027
350.5
P10809_1046
395.5
P10809_1065
411.9
P10809_1111
288.8
Naive CD4 T-cell nTPM: 301.1
Samples: 6
Max nTPM: 353.8
Min nTPM: 266.1
P10809_1015
286.8
P10809_1030
266.1
P10809_1049
296.7
P10809_1068
353.8
P10809_1085
282.3
P10809_1112
321.0
Naive CD8 T-cell nTPM: 324.5
Samples: 6
Max nTPM: 403.3
Min nTPM: 286.3
P10809_1016
326.2
P10809_1031
286.3
P10809_1050
316.3
P10809_1069
403.3
P10809_1087
302.0
P10809_1110
313.1
T-reg nTPM: 663.9
Samples: 6
Max nTPM: 721.9
Min nTPM: 563.9
P10809_1018
721.9
P10809_1037
563.9
P10809_1056
693.1
P10809_1075
683.8
P10809_1094
653.6
P10809_1106
667.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1085.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 811.3
Samples: 4
Max nTPM: 945.4
Min nTPM: 640.6
RHH5202_R3573
775.2
RHH5230_R3602
945.4
RHH5259_R3631
640.6
RHH5288_R3660
883.9
Effector memory CD8 T-cell nTPM: 990.4
Samples: 4
Max nTPM: 1088.6
Min nTPM: 831.4
RHH5203_R3574
831.4
RHH5231_R3603
1015.8
RHH5260_R3632
1025.7
RHH5289_R3661
1088.6
MAIT T-cell nTPM: 841.0
Samples: 4
Max nTPM: 905.3
Min nTPM: 773.9
RHH5233_R3605
863.7
RHH5205_R3576
820.9
RHH5262_R3634
905.3
RHH5297_R3663
773.9
Memory CD4 T-cell TFH nTPM: 962.0
Samples: 4
Max nTPM: 1015.0
Min nTPM: 925.8
RHH5300_R3666
964.5
RHH5236_R3608
1015.0
RHH5265_R3637
942.8
RHH5208_R3579
925.8
Memory CD4 T-cell Th1 nTPM: 846.3
Samples: 4
Max nTPM: 997.4
Min nTPM: 648.7
RHH5210_R3581
817.3
RHH5302_R3668
997.4
RHH5238_R3610
648.7
RHH5267_R3639
921.9
Memory CD4 T-cell Th1/Th17 nTPM: 970.6
Samples: 4
Max nTPM: 1166.0
Min nTPM: 733.6
RHH5303_R3669
1166.0
RHH5211_R3582
1077.7
RHH5239_R3611
733.6
RHH5268_R3640
904.9
Memory CD4 T-cell Th17 nTPM: 1048.5
Samples: 4
Max nTPM: 1177.1
Min nTPM: 872.4
RHH5304_R3670
1177.1
RHH5212_R3583
872.4
RHH5240_R3612
1145.0
RHH5269_R3641
999.5
Memory CD4 T-cell Th2 nTPM: 948.9
Samples: 4
Max nTPM: 1036.9
Min nTPM: 889.3
RHH5305_R3671
973.4
RHH5213_R3584
889.3
RHH5241_R3613
896.0
RHH5270_R3642
1036.9
Naive CD4 T-cell nTPM: 775.9
Samples: 4
Max nTPM: 874.4
Min nTPM: 687.9
RHH5306_R3672
874.4
RHH5214_R3585
687.9
RHH5242_R3614
716.2
RHH5271_R3643
825.1
Naive CD8 T-cell nTPM: 667.4
Samples: 4
Max nTPM: 765.6
Min nTPM: 500.3
RHH5201_R3572
663.5
RHH5229_R3601
500.3
RHH5258_R3630
740.2
RHH5287_R3659
765.6
Non-Vd2 gdTCR nTPM: 1054.4
Samples: 4
Max nTPM: 1214.0
Min nTPM: 933.6
RHH5235_R3607
1029.7
RHH5264_R3636
1040.4
RHH5207_R3578
1214.0
RHH5299_R3665
933.6
T-reg nTPM: 1019.2
Samples: 4
Max nTPM: 1190.6
Min nTPM: 858.5
RHH5301_R3667
974.0
RHH5237_R3609
1190.6
RHH5266_R3638
1053.5
RHH5209_R3580
858.5
Terminal effector memory CD4 T-cell nTPM: 1085.8
Samples: 2
Max nTPM: 1187.2
Min nTPM: 984.4
RHH5243_R3615
984.4
RHH5272_R3644
1187.2
Terminal effector memory CD8 T-cell nTPM: 1009.8
Samples: 4
Max nTPM: 1164.0
Min nTPM: 759.0
RHH5232_R3604
1113.1
RHH5204_R3575
759.0
RHH5261_R3633
1164.0
RHH5296_R3662
1003.2
Vd2 gdTCR nTPM: 926.4
Samples: 4
Max nTPM: 1040.2
Min nTPM: 785.7
RHH5234_R3606
864.1
RHH5206_R3577
1015.4
RHH5263_R3635
1040.2
RHH5298_R3664
785.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.