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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
411.7
nTPM
FANTOM5:
687.3
Scaled Tags Per Million
Pig:
0.0
nTPM
Allen mouse:
22.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
411.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 240.8
1984
Male, age 76, both hemispheres
293.0
2090
Male, age 80, both hemispheres
240.3
2188
Female, age 91, both hemispheres
237.9
2301
Female, age 85, both hemispheres
192.0
Dorsal cochlear nucleus nTPM: 255.9
2802
Male, age 74, right hemisphere
304.2
2058
Male, age 76, both hemispheres
269.2
2187
Female, age 91, both hemispheres
258.3
2378
Male, age 80, both hemispheres
225.5
2370
Male, age 61, both hemispheres
222.4
Dorsal tegmental nucleus nTPM: 259.5
2083
Male, age 80, both hemispheres
328.2
2326
Male, age 74, both hemispheres
285.9
1936
Male, age 76, left hemisphere
233.4
2358
Male, age 61, both hemispheres
190.2
Dorsolateral tegmental area nTPM: 290.6
2751
Female, age 85, both hemispheres
345.8
2654
Male, age 80, both hemispheres
313.1
2360
Male, age 74, both hemispheres
312.3
2141
Male, age 76, both hemispheres
286.9
2337
Male, age 61, both hemispheres
195.0
Kolliker-Fuse nucleus nTPM: 286.9
2163
Male, age 80, both hemispheres
376.0
2315
Male, age 76, right hemisphere
265.2
2793
Female, age 91, left hemisphere
219.6
Lateral lemniscal nuclei nTPM: 340.3
2169
Male, age 76, both hemispheres
414.5
2036
Male, age 80, both hemispheres
411.7
2746
Female, age 85, left hemisphere
381.4
2453
Male, age 74, right hemisphere
282.6
2320
Female, age 91, left hemisphere
211.2
Lateral parabrachial nucleus nTPM: 284.8
2139
Female, age 85, right hemisphere
424.5
2013
Male, age 80, both hemispheres
294.1
2790
Male, age 61, both hemispheres
214.0
2792
Male, age 76, both hemispheres
206.6
Lateral vestibular nucleus nTPM: 287.9
2184
Male, age 76, both hemispheres
337.2
2311
Male, age 80, both hemispheres
238.6
Locus coeruleus nTPM: 341.4
2123
Female, age 91, both hemispheres
491.2
2014
Male, age 55, unknown
387.3
2317
Female, age 72, unknown
332.0
2788
Male, age 74, unknown
310.3
2720
Male, age 74, both hemispheres
302.9
1980
Male, age 76, both hemispheres
302.0
2162
Male, age 80, both hemispheres
264.0
Medial parabrachial nucleus nTPM: 287.4
2170
Female, age 91, both hemispheres
322.6
2463
Female, age 85, right hemisphere
312.2
2854
Male, age 80, both hemispheres
289.2
2156
Male, age 61, both hemispheres
259.8
2786
Male, age 76, both hemispheres
253.5
Medial periolivary nuclei nTPM: 327.2
2063
Male, age 76, both hemispheres
447.6
2171
Female, age 85, both hemispheres
439.2
2791
Male, age 74, right hemisphere
333.7
2081
Male, age 80, both hemispheres
232.1
2458
Female, age 91, both hemispheres
183.3
Motor facial nucleus nTPM: 307.6
2062
Male, age 76, both hemispheres
476.3
2365
Male, age 74, right hemisphere
339.1
2795
Female, age 91, both hemispheres
273.5
2126
Male, age 61, both hemispheres
266.9
2697
Female, age 85, both hemispheres
249.3
2327
Male, age 80, both hemispheres
240.7
Motor trigeminal nucleus nTPM: 262.1
2079
Male, age 80, both hemispheres
319.2
2560
Male, age 74, both hemispheres
277.8
2309
Male, age 76, both hemispheres
266.3
2335
Male, age 61, both hemispheres
255.3
2321
Female, age 91, both hemispheres
191.8
Nuclei of the trapezoid body nTPM: 370.8
2159
Male, age 61, both hemispheres
518.2
2735
Female, age 85, both hemispheres
447.8
1983
Male, age 76, both hemispheres
426.7
2166
Male, age 80, both hemispheres
259.1
2368
Female, age 91, both hemispheres
202.1
Nucleus raphe magnus nTPM: 361.7
2160
Male, age 61, both hemispheres
585.9
2172
Female, age 85, both hemispheres
419.1
2455
Male, age 74, both hemispheres
378.8
2051
Male, age 76, both hemispheres
308.8
2328
Male, age 80, both hemispheres
260.4
2459
Female, age 91, both hemispheres
217.2
Paramedian reticular nucleus nTPM: 347.3
2050
Female, age 85, both hemispheres
438.3
2057
Male, age 80, both hemispheres
369.7
2313
Male, age 61, both hemispheres
336.4
2052
Male, age 76, both hemispheres
244.8
Pedunculopontine tegmental nucleus nTPM: 276.4
1921
Female, age 85, both hemispheres
311.9
2334
Male, age 80, both hemispheres
281.4
2338
Male, age 61, both hemispheres
235.9
Pontine nuclei nTPM: 411.7
2727
Male, age 61, right hemisphere
552.4
2787
Female, age 85, both hemispheres
549.5
1863
Male, age 55, unknown
540.8
2109
Female, age 72, unknown
455.1
1968
Male, age 76, left hemisphere
380.6
2454
Male, age 74, left hemisphere
317.4
2319
Female, age 91, both hemispheres
252.8
2115
Male, age 80, left hemisphere
244.9
Pontine raphe nucleus nTPM: 369.9
2122
Female, age 85, midline
444.6
2853
Male, age 76, midline
295.2
Posteroventral cochlear nucleus nTPM: 269.4
2752
Female, age 85, both hemispheres
380.7
2070
Male, age 76, both hemispheres
297.6
2341
Male, age 80, both hemispheres
232.8
2371
Male, age 61, both hemispheres
221.4
2135
Female, age 91, both hemispheres
214.6
Principal sensory trigeminal nucleus nTPM: 332.5
2158
Male, age 61, both hemispheres
463.2
2008
Male, age 80, left hemisphere
365.1
2324
Male, age 76, both hemispheres
292.6
2367
Female, age 91, left hemisphere
209.1
Reticular pontine nucleus, caudal nTPM: 277.4
2092
Male, age 76, both hemispheres
370.3
2332
Male, age 80, right hemisphere
285.0
2559
Male, age 74, both hemispheres
256.7
2457
Female, age 91, both hemispheres
197.7
Reticular pontine nucleus, oral nTPM: 313.2
2012
Female, age 85, both hemispheres
404.2
1939
Male, age 80, both hemispheres
350.4
2361
Male, age 74, both hemispheres
311.4
2167
Male, age 76, both hemispheres
287.5
2366
Female, age 91, both hemispheres
212.6
Reticulotegmental nucleus nTPM: 287.3
2325
Male, age 76, both hemispheres
331.1
2452
Male, age 74, both hemispheres
279.4
2333
Male, age 80, both hemispheres
275.8
2322
Female, age 91, both hemispheres
262.8
Spinal trigeminal nucleus, oral nTPM: 304.4
2737
Female, age 85, both hemispheres
374.6
2164
Male, age 80, both hemispheres
290.4
1978
Male, age 76, both hemispheres
248.1
Subcoeruleus area nTPM: 305.0
2323
Female, age 91, left hemisphere
335.8
1958
Male, age 80, both hemispheres
330.2
2369
Female, age 85, left hemisphere
300.9
2089
Male, age 76, left hemisphere
288.6
2451
Male, age 74, both hemispheres
269.6
Superior olive nTPM: 319.1
1875
Female, age 85, both hemispheres
465.9
2364
Male, age 74, right hemisphere
348.0
2020
Male, age 76, both hemispheres
342.1
2329
Male, age 80, right hemisphere
238.7
2561
Female, age 91, both hemispheres
200.7
Ventral periolivary nuclei nTPM: 320.4
2130
Female, age 85, both hemispheres
381.4
2165
Male, age 80, both hemispheres
351.3
2023
Male, age 76, both hemispheres
338.1
2794
Female, age 91, left hemisphere
210.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 279.7
2840
Female, age 85, both hemispheres
330.1
1959
Male, age 76, both hemispheres
325.4
2449
Male, age 74, both hemispheres
311.7
2161
Male, age 80, both hemispheres
264.5
2359
Male, age 61, both hemispheres
237.1
2456
Female, age 91, both hemispheres
209.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.0
Pig sample
Sample description
nTPM
Pons nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
Sample A
Female
0.0
Sample B
Female
0.0
Sample C
Male
0.0
Sample D
Male
0.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
