HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:247.9 nTPM
HPA Brain:312.8 nTPM
GTEx:247.9 nTPM
FANTOM5:320.4 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:1299.4 nTPM
Allen mouse:30.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001520Antibody HPA001528Antibody CAB017527
Glial cells LowMediumNot detected
Neuronal cells MediumMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 312.8
Sample id Sample description nTPM
Hippocampus
nTPM: 261.1
1898 Male, age 80, left hemisphere 387.9
2529 Female, age 94, left hemisphere 252.8
2148 Female, age 91, left hemisphere 241.9
2621 Female, age 67, right hemisphere 240.7
1855 Male, age 76, left hemisphere 233.2
1911 Female, age 85, right hemisphere 210.1
Dentate gyrus
nTPM: 260.9
1927 Female, age 91, both hemispheres 336.8
2010 Male, age 76, both hemispheres 299.0
2528 Male, age 74, both hemispheres 260.3
2530 Female, age 94, left hemisphere 255.9
2246 Female, age 85, both hemispheres 230.8
2531 Female, age 67, both hemispheres 182.5
Entorhinal gyrus
nTPM: 237.2
2764 Male, age 80, right hemisphere 303.3
1938 Female, age 85, left hemisphere 268.1
1787 Male, age 76, left hemisphere 241.6
2117 Female, age 91, right hemisphere 230.6
2613 Female, age 94, left hemisphere 205.3
2686 Male, age 75, right hemisphere 174.7
Hippocampus, CA1
nTPM: 312.8
2749 Male, age 80, left hemisphere 520.4
1873 Female, age 85, both hemispheres 292.3
2527 Male, age 74, both hemispheres 291.5
2082 Female, age 91, right hemisphere 234.4
2045 Male, age 76, both hemispheres 225.3
Hippocampus, CA2
nTPM: 305.7
2249 Male, age 74, both hemispheres 399.7
1892 Male, age 76, both hemispheres 366.8
1963 Male, age 80, left hemisphere 364.1
2437 Female, age 94, left hemisphere 253.5
1940 Female, age 85, left hemisphere 228.9
2113 Female, age 91, right hemisphere 221.0
Hippocampus, CA3
nTPM: 295.5
2436 Male, age 74, both hemispheres 472.3
2137 Male, age 80, left hemisphere 344.8
1867 Male, age 76, both hemispheres 311.8
1891 Female, age 85, both hemispheres 243.9
2620 Female, age 94, left hemisphere 214.3
2861 Female, age 67, both hemispheres 186.2
Parahippocampal cortex
nTPM: 245.5
1850 Male, age 80, both hemispheres 331.0
1990 Female, age 91, right hemisphere 308.1
2250 Female, age 67, right hemisphere 279.3
2245 Female, age 91, both hemispheres 255.7
1933 Female, age 85, both hemispheres 246.8
2018 Male, age 76, both hemispheres 226.8
2693 Female, age 94, both hemispheres 217.6
2532 Female, age 72, left hemisphere 211.9
2622 Female, age 67, right hemisphere 189.5
2692 Male, age 74, both hemispheres 187.9
Perirhinal gyrus
nTPM: 300.7
1847 Female, age 91, left hemisphere 388.9
1794 Male, age 80, right hemisphere 341.1
1841 Female, age 85, right hemisphere 292.2
2521 Female, age 94, right hemisphere 257.3
2848 Male, age 76, right hemisphere 223.7
Subiculum
nTPM: 242.8
1901 Male, age 80, both hemispheres 296.6
1977 Female, age 85, both hemispheres 286.4
2619 Male, age 74, both hemispheres 228.9
2438 Female, age 94, left hemisphere 227.1
2729 Female, age 91, right hemisphere 218.2
2042 Male, age 76, both hemispheres 199.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 247.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 247.9
Samples: 197

Max nTPM: 503.0
Min nTPM: 83.3
Std nTPM: 85.5
Median nTPM: 229.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 503.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 488.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 481.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 466.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 464.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 458.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 449.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 430.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 430.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 428.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 418.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 320.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 320.4
FF:10169-103B7 60 years, female 458.0
FF:10153-102I9 76 years, female 182.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.0
Pig sample Sample description nTPM
Subiculum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1299.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1210.9
Samples: 4

Max nTPM: 1270.3
Min nTPM: 1151.6
Sample A Male 1151.6
Sample B Male 1198.0
Sample C Female 1270.3
Sample D Female 1223.5
Hippocampal formation
nTPM: 1299.5
Samples: 4

Max nTPM: 1382.3
Min nTPM: 1202.7
Sample A Male 1382.3
Sample B Male 1202.7
Sample C Female 1311.4
Sample D Female 1301.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 30.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 30.1
70528264 Antisense, RP_050623_02_C01, Mouse strain C57BL/6J (56 days, male) 30.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org