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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.5
nTPM
Monaco:
123.9
nTPM
Schmiedel:
213.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.5
HPA sample
nTPM
gdT-cell nTPM: 60.2
Samples: 6
Max nTPM: 77.3
Min nTPM: 49.6
P10809_1007
54.3
P10809_1022
55.8
P10809_1041
69.4
P10809_1060
54.8
P10809_1077
77.3
P10809_1098
49.6
MAIT T-cell nTPM: 74.5
Samples: 6
Max nTPM: 98.8
Min nTPM: 46.8
P10809_1006
46.8
P10809_1024
89.5
P10809_1043
66.6
P10809_1062
73.5
P10809_1083
98.8
P10809_1097
71.9
Memory CD4 T-cell nTPM: 67.1
Samples: 6
Max nTPM: 80.1
Min nTPM: 50.9
P10809_1014
55.3
P10809_1026
74.3
P10809_1045
77.7
P10809_1064
80.1
P10809_1086
64.0
P10809_1113
50.9
Memory CD8 T-cell nTPM: 67.9
Samples: 5
Max nTPM: 86.3
Min nTPM: 54.6
P10809_1012
54.6
P10809_1027
66.5
P10809_1046
70.6
P10809_1065
86.3
P10809_1111
61.3
Naive CD4 T-cell nTPM: 79.5
Samples: 6
Max nTPM: 101.9
Min nTPM: 55.5
P10809_1015
55.5
P10809_1030
101.9
P10809_1049
92.7
P10809_1068
87.0
P10809_1085
78.3
P10809_1112
61.5
Naive CD8 T-cell nTPM: 74.4
Samples: 6
Max nTPM: 94.0
Min nTPM: 61.9
P10809_1016
61.9
P10809_1031
94.0
P10809_1050
78.6
P10809_1069
75.9
P10809_1087
69.3
P10809_1110
66.5
T-reg nTPM: 71.9
Samples: 6
Max nTPM: 116.6
Min nTPM: 49.8
P10809_1018
49.8
P10809_1037
58.1
P10809_1056
116.6
P10809_1075
78.8
P10809_1094
75.3
P10809_1106
52.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 110.2
Min nTPM: 64.4
RHH5202_R3573
98.0
RHH5230_R3602
88.4
RHH5259_R3631
64.4
RHH5288_R3660
110.2
Effector memory CD8 T-cell nTPM: 98.2
Samples: 4
Max nTPM: 111.6
Min nTPM: 82.8
RHH5203_R3574
95.1
RHH5231_R3603
82.8
RHH5260_R3632
111.6
RHH5289_R3661
103.3
MAIT T-cell nTPM: 120.3
Samples: 4
Max nTPM: 134.4
Min nTPM: 97.4
RHH5233_R3605
123.1
RHH5205_R3576
134.4
RHH5262_R3634
126.4
RHH5297_R3663
97.4
Memory CD4 T-cell TFH nTPM: 93.6
Samples: 4
Max nTPM: 123.5
Min nTPM: 68.6
RHH5300_R3666
83.7
RHH5236_R3608
123.5
RHH5265_R3637
98.7
RHH5208_R3579
68.6
Memory CD4 T-cell Th1 nTPM: 82.5
Samples: 4
Max nTPM: 95.9
Min nTPM: 68.5
RHH5210_R3581
81.1
RHH5302_R3668
95.9
RHH5238_R3610
68.5
RHH5267_R3639
84.4
Memory CD4 T-cell Th1/Th17 nTPM: 107.4
Samples: 4
Max nTPM: 119.0
Min nTPM: 95.0
RHH5303_R3669
111.9
RHH5211_R3582
119.0
RHH5239_R3611
103.8
RHH5268_R3640
95.0
Memory CD4 T-cell Th17 nTPM: 111.5
Samples: 4
Max nTPM: 128.7
Min nTPM: 85.9
RHH5304_R3670
128.7
RHH5212_R3583
105.8
RHH5240_R3612
125.4
RHH5269_R3641
85.9
Memory CD4 T-cell Th2 nTPM: 110.3
Samples: 4
Max nTPM: 119.4
Min nTPM: 89.3
RHH5305_R3671
117.0
RHH5213_R3584
119.4
RHH5241_R3613
89.3
RHH5270_R3642
115.6
Naive CD4 T-cell nTPM: 104.5
Samples: 4
Max nTPM: 112.2
Min nTPM: 94.6
RHH5306_R3672
94.6
RHH5214_R3585
106.2
RHH5242_R3614
112.2
RHH5271_R3643
105.1
Naive CD8 T-cell nTPM: 123.9
Samples: 4
Max nTPM: 157.1
Min nTPM: 104.9
RHH5201_R3572
157.1
RHH5229_R3601
119.3
RHH5258_R3630
104.9
RHH5287_R3659
114.2
Non-Vd2 gdTCR nTPM: 86.7
Samples: 4
Max nTPM: 111.6
Min nTPM: 62.8
RHH5235_R3607
62.8
RHH5264_R3636
111.6
RHH5207_R3578
96.9
RHH5299_R3665
75.3
T-reg nTPM: 117.3
Samples: 4
Max nTPM: 127.1
Min nTPM: 101.1
RHH5301_R3667
101.1
RHH5237_R3609
126.1
RHH5266_R3638
127.1
RHH5209_R3580
114.9
Terminal effector memory CD4 T-cell nTPM: 86.0
Samples: 2
Max nTPM: 98.7
Min nTPM: 73.2
RHH5243_R3615
73.2
RHH5272_R3644
98.7
Terminal effector memory CD8 T-cell nTPM: 89.5
Samples: 4
Max nTPM: 116.2
Min nTPM: 73.5
RHH5232_R3604
76.4
RHH5204_R3575
73.5
RHH5261_R3633
116.2
RHH5296_R3662
91.8
Vd2 gdTCR nTPM: 100.5
Samples: 4
Max nTPM: 136.7
Min nTPM: 76.5
RHH5234_R3606
76.5
RHH5206_R3577
96.9
RHH5263_R3635
136.7
RHH5298_R3664
91.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
