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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
45.6
nTPM
Monaco:
121.3
nTPM
Schmiedel:
113.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.6
HPA sample
nTPM
gdT-cell nTPM: 11.0
Samples: 6
Max nTPM: 14.4
Min nTPM: 8.1
P10809_1007
11.9
P10809_1022
9.6
P10809_1041
13.0
P10809_1060
8.7
P10809_1077
14.4
P10809_1098
8.1
MAIT T-cell nTPM: 42.6
Samples: 6
Max nTPM: 46.7
Min nTPM: 37.9
P10809_1006
45.9
P10809_1024
44.1
P10809_1043
41.9
P10809_1062
46.7
P10809_1083
37.9
P10809_1097
38.9
Memory CD4 T-cell nTPM: 25.7
Samples: 6
Max nTPM: 31.2
Min nTPM: 21.3
P10809_1014
26.1
P10809_1026
23.3
P10809_1045
31.2
P10809_1064
29.8
P10809_1086
21.3
P10809_1113
22.4
Memory CD8 T-cell nTPM: 14.9
Samples: 5
Max nTPM: 23.8
Min nTPM: 7.1
P10809_1012
16.8
P10809_1027
7.1
P10809_1046
15.4
P10809_1065
23.8
P10809_1111
11.4
Naive CD4 T-cell nTPM: 15.3
Samples: 6
Max nTPM: 21.7
Min nTPM: 10.7
P10809_1015
16.2
P10809_1030
15.6
P10809_1049
15.1
P10809_1068
21.7
P10809_1085
10.7
P10809_1112
12.3
Naive CD8 T-cell nTPM: 11.4
Samples: 6
Max nTPM: 15.1
Min nTPM: 8.9
P10809_1016
8.9
P10809_1031
15.1
P10809_1050
9.4
P10809_1069
14.3
P10809_1087
9.0
P10809_1110
11.4
T-reg nTPM: 45.6
Samples: 6
Max nTPM: 69.4
Min nTPM: 36.1
P10809_1018
38.3
P10809_1037
47.2
P10809_1056
36.1
P10809_1075
69.4
P10809_1094
38.8
P10809_1106
43.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 52.8
Samples: 4
Max nTPM: 68.6
Min nTPM: 43.0
RHH5202_R3573
43.0
RHH5230_R3602
47.2
RHH5259_R3631
68.6
RHH5288_R3660
52.5
Effector memory CD8 T-cell nTPM: 40.4
Samples: 4
Max nTPM: 53.2
Min nTPM: 30.3
RHH5203_R3574
30.3
RHH5231_R3603
34.9
RHH5260_R3632
43.3
RHH5289_R3661
53.2
MAIT T-cell nTPM: 110.8
Samples: 4
Max nTPM: 161.9
Min nTPM: 72.5
RHH5233_R3605
72.5
RHH5205_R3576
161.9
RHH5262_R3634
100.8
RHH5297_R3663
107.8
Memory CD4 T-cell TFH nTPM: 56.8
Samples: 4
Max nTPM: 69.9
Min nTPM: 38.8
RHH5300_R3666
69.9
RHH5236_R3608
67.3
RHH5265_R3637
51.0
RHH5208_R3579
38.8
Memory CD4 T-cell Th1 nTPM: 57.2
Samples: 4
Max nTPM: 66.1
Min nTPM: 49.7
RHH5210_R3581
55.0
RHH5302_R3668
66.1
RHH5238_R3610
58.0
RHH5267_R3639
49.7
Memory CD4 T-cell Th1/Th17 nTPM: 103.1
Samples: 4
Max nTPM: 115.4
Min nTPM: 84.6
RHH5303_R3669
84.6
RHH5211_R3582
114.2
RHH5239_R3611
115.4
RHH5268_R3640
98.1
Memory CD4 T-cell Th17 nTPM: 121.3
Samples: 4
Max nTPM: 146.7
Min nTPM: 100.7
RHH5304_R3670
120.0
RHH5212_R3583
117.6
RHH5240_R3612
100.7
RHH5269_R3641
146.7
Memory CD4 T-cell Th2 nTPM: 64.4
Samples: 4
Max nTPM: 78.8
Min nTPM: 52.2
RHH5305_R3671
61.9
RHH5213_R3584
64.6
RHH5241_R3613
52.2
RHH5270_R3642
78.8
Naive CD4 T-cell nTPM: 53.8
Samples: 4
Max nTPM: 57.0
Min nTPM: 46.8
RHH5306_R3672
55.3
RHH5214_R3585
46.8
RHH5242_R3614
56.2
RHH5271_R3643
57.0
Naive CD8 T-cell nTPM: 35.3
Samples: 4
Max nTPM: 38.9
Min nTPM: 33.2
RHH5201_R3572
33.2
RHH5229_R3601
38.9
RHH5258_R3630
33.6
RHH5287_R3659
35.6
Non-Vd2 gdTCR nTPM: 33.4
Samples: 4
Max nTPM: 38.2
Min nTPM: 29.8
RHH5235_R3607
38.2
RHH5264_R3636
29.8
RHH5207_R3578
33.6
RHH5299_R3665
31.8
T-reg nTPM: 85.4
Samples: 4
Max nTPM: 99.3
Min nTPM: 69.7
RHH5301_R3667
69.7
RHH5237_R3609
99.3
RHH5266_R3638
97.8
RHH5209_R3580
74.6
Terminal effector memory CD4 T-cell nTPM: 50.1
Samples: 2
Max nTPM: 53.6
Min nTPM: 46.5
RHH5243_R3615
53.6
RHH5272_R3644
46.5
Terminal effector memory CD8 T-cell nTPM: 33.9
Samples: 4
Max nTPM: 37.3
Min nTPM: 29.5
RHH5232_R3604
29.5
RHH5204_R3575
34.8
RHH5261_R3633
34.1
RHH5296_R3662
37.3
Vd2 gdTCR nTPM: 38.0
Samples: 4
Max nTPM: 47.3
Min nTPM: 33.2
RHH5234_R3606
47.3
RHH5206_R3577
35.4
RHH5263_R3635
36.2
RHH5298_R3664
33.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
