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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.8
nTPM
Monaco:
16.9
nTPM
Schmiedel:
29.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.8
HPA sample
nTPM
gdT-cell nTPM: 14.3
Samples: 6
Max nTPM: 20.1
Min nTPM: 8.9
P10809_1007
10.1
P10809_1022
8.9
P10809_1041
11.2
P10809_1060
15.6
P10809_1077
20.1
P10809_1098
19.7
MAIT T-cell nTPM: 15.3
Samples: 6
Max nTPM: 27.1
Min nTPM: 9.4
P10809_1006
9.6
P10809_1024
15.0
P10809_1043
9.4
P10809_1062
12.9
P10809_1083
17.8
P10809_1097
27.1
Memory CD4 T-cell nTPM: 13.7
Samples: 6
Max nTPM: 18.0
Min nTPM: 8.6
P10809_1014
10.0
P10809_1026
13.9
P10809_1045
8.6
P10809_1064
15.5
P10809_1086
18.0
P10809_1113
16.0
Memory CD8 T-cell nTPM: 15.9
Samples: 5
Max nTPM: 22.8
Min nTPM: 8.9
P10809_1012
8.9
P10809_1027
22.8
P10809_1046
9.0
P10809_1065
18.7
P10809_1111
20.1
Naive CD4 T-cell nTPM: 15.4
Samples: 6
Max nTPM: 19.5
Min nTPM: 9.5
P10809_1015
18.1
P10809_1030
11.0
P10809_1049
9.5
P10809_1068
17.4
P10809_1085
16.8
P10809_1112
19.5
Naive CD8 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 25.7
Min nTPM: 11.4
P10809_1016
15.5
P10809_1031
11.4
P10809_1050
13.4
P10809_1069
24.7
P10809_1087
25.7
P10809_1110
22.2
T-reg nTPM: 13.5
Samples: 6
Max nTPM: 25.8
Min nTPM: 4.3
P10809_1018
4.3
P10809_1037
15.0
P10809_1056
12.8
P10809_1075
25.8
P10809_1094
11.0
P10809_1106
12.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 9.9
Min nTPM: 5.5
RHH5202_R3573
8.6
RHH5230_R3602
9.9
RHH5259_R3631
5.5
RHH5288_R3660
7.5
Effector memory CD8 T-cell nTPM: 8.9
Samples: 4
Max nTPM: 11.0
Min nTPM: 6.9
RHH5203_R3574
9.2
RHH5231_R3603
6.9
RHH5260_R3632
11.0
RHH5289_R3661
8.3
MAIT T-cell nTPM: 9.7
Samples: 4
Max nTPM: 15.9
Min nTPM: 4.1
RHH5233_R3605
12.3
RHH5205_R3576
4.1
RHH5262_R3634
6.4
RHH5297_R3663
15.9
Memory CD4 T-cell TFH nTPM: 16.9
Samples: 4
Max nTPM: 39.5
Min nTPM: 4.2
RHH5300_R3666
11.0
RHH5236_R3608
39.5
RHH5265_R3637
12.7
RHH5208_R3579
4.2
Memory CD4 T-cell Th1 nTPM: 10.9
Samples: 4
Max nTPM: 16.7
Min nTPM: 5.9
RHH5210_R3581
10.8
RHH5302_R3668
5.9
RHH5238_R3610
10.3
RHH5267_R3639
16.7
Memory CD4 T-cell Th1/Th17 nTPM: 5.0
Samples: 4
Max nTPM: 6.6
Min nTPM: 2.4
RHH5303_R3669
5.7
RHH5211_R3582
2.4
RHH5239_R3611
6.6
RHH5268_R3640
5.1
Memory CD4 T-cell Th17 nTPM: 7.2
Samples: 4
Max nTPM: 9.6
Min nTPM: 5.0
RHH5304_R3670
6.0
RHH5212_R3583
9.6
RHH5240_R3612
8.0
RHH5269_R3641
5.0
Memory CD4 T-cell Th2 nTPM: 8.5
Samples: 4
Max nTPM: 12.3
Min nTPM: 2.9
RHH5305_R3671
10.0
RHH5213_R3584
8.8
RHH5241_R3613
12.3
RHH5270_R3642
2.9
Naive CD4 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 16.5
Min nTPM: 8.3
RHH5306_R3672
16.5
RHH5214_R3585
8.3
RHH5242_R3614
12.9
RHH5271_R3643
9.9
Naive CD8 T-cell nTPM: 11.6
Samples: 4
Max nTPM: 17.2
Min nTPM: 5.3
RHH5201_R3572
5.3
RHH5229_R3601
6.7
RHH5258_R3630
17.1
RHH5287_R3659
17.2
Non-Vd2 gdTCR nTPM: 7.1
Samples: 4
Max nTPM: 10.7
Min nTPM: 3.1
RHH5235_R3607
10.6
RHH5264_R3636
3.9
RHH5207_R3578
3.1
RHH5299_R3665
10.7
T-reg nTPM: 10.5
Samples: 4
Max nTPM: 14.5
Min nTPM: 8.1
RHH5301_R3667
14.5
RHH5237_R3609
9.6
RHH5266_R3638
9.7
RHH5209_R3580
8.1
Terminal effector memory CD4 T-cell nTPM: 7.5
Samples: 2
Max nTPM: 7.6
Min nTPM: 7.3
RHH5243_R3615
7.6
RHH5272_R3644
7.3
Terminal effector memory CD8 T-cell nTPM: 14.1
Samples: 4
Max nTPM: 32.2
Min nTPM: 6.0
RHH5232_R3604
8.2
RHH5204_R3575
32.2
RHH5261_R3633
6.0
RHH5296_R3662
9.8
Vd2 gdTCR nTPM: 11.6
Samples: 4
Max nTPM: 21.4
Min nTPM: 4.4
RHH5234_R3606
16.1
RHH5206_R3577
4.4
RHH5263_R3635
4.4
RHH5298_R3664
21.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
