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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
621.6
nTPM
Monaco:
558.0
nTPM
Schmiedel:
169.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
621.6
HPA sample
nTPM
gdT-cell nTPM: 353.3
Samples: 6
Max nTPM: 428.8
Min nTPM: 318.5
P10809_1007
351.8
P10809_1022
322.1
P10809_1041
356.3
P10809_1060
342.5
P10809_1077
428.8
P10809_1098
318.5
MAIT T-cell nTPM: 322.9
Samples: 6
Max nTPM: 366.1
Min nTPM: 291.1
P10809_1006
304.3
P10809_1024
366.1
P10809_1043
291.1
P10809_1062
291.1
P10809_1083
335.0
P10809_1097
349.9
Memory CD4 T-cell nTPM: 362.2
Samples: 6
Max nTPM: 389.6
Min nTPM: 335.9
P10809_1014
365.9
P10809_1026
335.9
P10809_1045
340.7
P10809_1064
368.1
P10809_1086
389.6
P10809_1113
372.9
Memory CD8 T-cell nTPM: 398.7
Samples: 5
Max nTPM: 449.5
Min nTPM: 349.6
P10809_1012
364.1
P10809_1027
449.5
P10809_1046
349.6
P10809_1065
422.9
P10809_1111
407.6
Naive CD4 T-cell nTPM: 267.8
Samples: 6
Max nTPM: 322.2
Min nTPM: 243.4
P10809_1015
322.2
P10809_1030
261.4
P10809_1049
244.7
P10809_1068
243.4
P10809_1085
276.0
P10809_1112
259.3
Naive CD8 T-cell nTPM: 350.6
Samples: 6
Max nTPM: 418.0
Min nTPM: 297.6
P10809_1016
343.5
P10809_1031
297.6
P10809_1050
332.6
P10809_1069
406.2
P10809_1087
418.0
P10809_1110
305.6
T-reg nTPM: 621.6
Samples: 6
Max nTPM: 740.8
Min nTPM: 432.8
P10809_1018
572.8
P10809_1037
740.8
P10809_1056
432.8
P10809_1075
642.9
P10809_1094
664.1
P10809_1106
676.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
558.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 375.9
Samples: 4
Max nTPM: 565.5
Min nTPM: 246.5
RHH5202_R3573
357.9
RHH5230_R3602
246.5
RHH5259_R3631
333.7
RHH5288_R3660
565.5
Effector memory CD8 T-cell nTPM: 334.7
Samples: 4
Max nTPM: 418.3
Min nTPM: 257.0
RHH5203_R3574
418.3
RHH5231_R3603
342.4
RHH5260_R3632
321.2
RHH5289_R3661
257.0
MAIT T-cell nTPM: 336.2
Samples: 4
Max nTPM: 424.4
Min nTPM: 266.6
RHH5233_R3605
371.2
RHH5205_R3576
266.6
RHH5262_R3634
282.5
RHH5297_R3663
424.4
Memory CD4 T-cell TFH nTPM: 408.6
Samples: 4
Max nTPM: 516.9
Min nTPM: 328.1
RHH5300_R3666
439.5
RHH5236_R3608
516.9
RHH5265_R3637
328.1
RHH5208_R3579
349.8
Memory CD4 T-cell Th1 nTPM: 415.7
Samples: 4
Max nTPM: 712.4
Min nTPM: 270.6
RHH5210_R3581
299.5
RHH5302_R3668
712.4
RHH5238_R3610
380.2
RHH5267_R3639
270.6
Memory CD4 T-cell Th1/Th17 nTPM: 379.6
Samples: 4
Max nTPM: 557.7
Min nTPM: 175.4
RHH5303_R3669
557.7
RHH5211_R3582
460.8
RHH5239_R3611
175.4
RHH5268_R3640
324.6
Memory CD4 T-cell Th17 nTPM: 293.3
Samples: 4
Max nTPM: 363.9
Min nTPM: 219.2
RHH5304_R3670
337.0
RHH5212_R3583
363.9
RHH5240_R3612
253.1
RHH5269_R3641
219.2
Memory CD4 T-cell Th2 nTPM: 363.7
Samples: 4
Max nTPM: 442.3
Min nTPM: 269.5
RHH5305_R3671
404.5
RHH5213_R3584
338.4
RHH5241_R3613
442.3
RHH5270_R3642
269.5
Naive CD4 T-cell nTPM: 293.6
Samples: 4
Max nTPM: 369.4
Min nTPM: 208.6
RHH5306_R3672
359.4
RHH5214_R3585
369.4
RHH5242_R3614
237.0
RHH5271_R3643
208.6
Naive CD8 T-cell nTPM: 257.3
Samples: 4
Max nTPM: 349.8
Min nTPM: 187.6
RHH5201_R3572
219.9
RHH5229_R3601
187.6
RHH5258_R3630
349.8
RHH5287_R3659
271.9
Non-Vd2 gdTCR nTPM: 450.3
Samples: 4
Max nTPM: 716.1
Min nTPM: 248.9
RHH5235_R3607
248.9
RHH5264_R3636
476.3
RHH5207_R3578
359.9
RHH5299_R3665
716.1
T-reg nTPM: 398.5
Samples: 4
Max nTPM: 623.6
Min nTPM: 274.4
RHH5301_R3667
623.6
RHH5237_R3609
394.9
RHH5266_R3638
274.4
RHH5209_R3580
301.1
Terminal effector memory CD4 T-cell nTPM: 338.7
Samples: 2
Max nTPM: 414.5
Min nTPM: 262.8
RHH5243_R3615
262.8
RHH5272_R3644
414.5
Terminal effector memory CD8 T-cell nTPM: 558.0
Samples: 4
Max nTPM: 958.0
Min nTPM: 309.4
RHH5232_R3604
309.4
RHH5204_R3575
958.0
RHH5261_R3633
354.8
RHH5296_R3662
609.6
Vd2 gdTCR nTPM: 502.7
Samples: 4
Max nTPM: 709.1
Min nTPM: 271.0
RHH5234_R3606
369.1
RHH5206_R3577
709.1
RHH5263_R3635
271.0
RHH5298_R3664
661.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.