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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
225.4
nTPM
Monaco:
139.7
nTPM
Schmiedel:
134.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.4
HPA sample
nTPM
gdT-cell nTPM: 139.4
Samples: 6
Max nTPM: 180.6
Min nTPM: 89.2
P10809_1007
89.2
P10809_1022
113.8
P10809_1041
145.0
P10809_1060
154.6
P10809_1077
180.6
P10809_1098
153.1
MAIT T-cell nTPM: 155.6
Samples: 6
Max nTPM: 200.9
Min nTPM: 75.8
P10809_1006
75.8
P10809_1024
200.9
P10809_1043
129.8
P10809_1062
140.5
P10809_1083
198.9
P10809_1097
187.8
Memory CD4 T-cell nTPM: 176.0
Samples: 6
Max nTPM: 220.1
Min nTPM: 120.1
P10809_1014
120.1
P10809_1026
192.5
P10809_1045
140.1
P10809_1064
199.4
P10809_1086
220.1
P10809_1113
183.7
Memory CD8 T-cell nTPM: 164.8
Samples: 5
Max nTPM: 194.6
Min nTPM: 104.6
P10809_1012
104.6
P10809_1027
191.1
P10809_1046
143.6
P10809_1065
190.3
P10809_1111
194.6
Naive CD4 T-cell nTPM: 160.3
Samples: 6
Max nTPM: 188.5
Min nTPM: 109.7
P10809_1015
109.7
P10809_1030
188.5
P10809_1049
187.3
P10809_1068
156.0
P10809_1085
174.0
P10809_1112
146.0
Naive CD8 T-cell nTPM: 157.3
Samples: 6
Max nTPM: 203.1
Min nTPM: 93.0
P10809_1016
93.0
P10809_1031
158.0
P10809_1050
154.6
P10809_1069
180.1
P10809_1087
203.1
P10809_1110
155.0
T-reg nTPM: 225.4
Samples: 6
Max nTPM: 274.6
Min nTPM: 136.1
P10809_1018
136.1
P10809_1037
274.6
P10809_1056
234.2
P10809_1075
220.6
P10809_1094
227.1
P10809_1106
260.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.9
Samples: 4
Max nTPM: 158.1
Min nTPM: 87.0
RHH5202_R3573
93.0
RHH5230_R3602
87.0
RHH5259_R3631
93.5
RHH5288_R3660
158.1
Effector memory CD8 T-cell nTPM: 115.1
Samples: 4
Max nTPM: 137.4
Min nTPM: 102.4
RHH5203_R3574
137.4
RHH5231_R3603
102.4
RHH5260_R3632
103.8
RHH5289_R3661
116.8
MAIT T-cell nTPM: 113.3
Samples: 4
Max nTPM: 138.1
Min nTPM: 82.2
RHH5233_R3605
96.3
RHH5205_R3576
82.2
RHH5262_R3634
138.1
RHH5297_R3663
136.4
Memory CD4 T-cell TFH nTPM: 129.1
Samples: 4
Max nTPM: 165.9
Min nTPM: 102.8
RHH5300_R3666
123.4
RHH5236_R3608
165.9
RHH5265_R3637
102.8
RHH5208_R3579
124.4
Memory CD4 T-cell Th1 nTPM: 115.2
Samples: 4
Max nTPM: 155.6
Min nTPM: 93.1
RHH5210_R3581
113.6
RHH5302_R3668
155.6
RHH5238_R3610
98.4
RHH5267_R3639
93.1
Memory CD4 T-cell Th1/Th17 nTPM: 121.3
Samples: 4
Max nTPM: 169.5
Min nTPM: 89.4
RHH5303_R3669
169.5
RHH5211_R3582
121.5
RHH5239_R3611
89.4
RHH5268_R3640
104.7
Memory CD4 T-cell Th17 nTPM: 96.9
Samples: 4
Max nTPM: 111.1
Min nTPM: 83.8
RHH5304_R3670
111.1
RHH5212_R3583
108.2
RHH5240_R3612
84.6
RHH5269_R3641
83.8
Memory CD4 T-cell Th2 nTPM: 139.7
Samples: 4
Max nTPM: 166.8
Min nTPM: 122.7
RHH5305_R3671
141.8
RHH5213_R3584
127.3
RHH5241_R3613
166.8
RHH5270_R3642
122.7
Naive CD4 T-cell nTPM: 113.2
Samples: 4
Max nTPM: 125.9
Min nTPM: 91.2
RHH5306_R3672
124.3
RHH5214_R3585
125.9
RHH5242_R3614
111.4
RHH5271_R3643
91.2
Naive CD8 T-cell nTPM: 86.0
Samples: 4
Max nTPM: 112.6
Min nTPM: 44.3
RHH5201_R3572
112.6
RHH5229_R3601
44.3
RHH5258_R3630
106.5
RHH5287_R3659
80.4
Non-Vd2 gdTCR nTPM: 131.3
Samples: 4
Max nTPM: 153.9
Min nTPM: 90.7
RHH5235_R3607
90.7
RHH5264_R3636
152.4
RHH5207_R3578
128.2
RHH5299_R3665
153.9
T-reg nTPM: 124.4
Samples: 4
Max nTPM: 158.1
Min nTPM: 94.0
RHH5301_R3667
158.1
RHH5237_R3609
137.4
RHH5266_R3638
94.0
RHH5209_R3580
107.9
Terminal effector memory CD4 T-cell nTPM: 105.7
Samples: 2
Max nTPM: 122.7
Min nTPM: 88.7
RHH5243_R3615
88.7
RHH5272_R3644
122.7
Terminal effector memory CD8 T-cell nTPM: 133.3
Samples: 4
Max nTPM: 190.3
Min nTPM: 91.2
RHH5232_R3604
91.2
RHH5204_R3575
190.3
RHH5261_R3633
110.0
RHH5296_R3662
141.6
Vd2 gdTCR nTPM: 123.2
Samples: 4
Max nTPM: 169.9
Min nTPM: 92.4
RHH5234_R3606
92.4
RHH5206_R3577
169.9
RHH5263_R3635
95.9
RHH5298_R3664
134.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
