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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.6
nTPM
Monaco:
123.5
nTPM
Schmiedel:
108.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.6
HPA sample
nTPM
gdT-cell nTPM: 25.7
Samples: 6
Max nTPM: 29.8
Min nTPM: 19.3
P10809_1007
26.5
P10809_1022
29.8
P10809_1041
24.2
P10809_1060
28.8
P10809_1077
19.3
P10809_1098
25.5
MAIT T-cell nTPM: 33.5
Samples: 6
Max nTPM: 58.8
Min nTPM: 18.8
P10809_1006
45.2
P10809_1024
58.8
P10809_1043
21.4
P10809_1062
29.0
P10809_1083
18.8
P10809_1097
27.9
Memory CD4 T-cell nTPM: 30.1
Samples: 6
Max nTPM: 35.4
Min nTPM: 21.5
P10809_1014
31.6
P10809_1026
31.3
P10809_1045
35.4
P10809_1064
30.0
P10809_1086
21.5
P10809_1113
30.8
Memory CD8 T-cell nTPM: 29.6
Samples: 5
Max nTPM: 38.1
Min nTPM: 25.9
P10809_1012
38.1
P10809_1027
29.3
P10809_1046
26.4
P10809_1065
25.9
P10809_1111
28.3
Naive CD4 T-cell nTPM: 29.0
Samples: 6
Max nTPM: 39.3
Min nTPM: 24.3
P10809_1015
25.4
P10809_1030
39.3
P10809_1049
26.0
P10809_1068
34.7
P10809_1085
24.5
P10809_1112
24.3
Naive CD8 T-cell nTPM: 21.8
Samples: 6
Max nTPM: 25.7
Min nTPM: 16.1
P10809_1016
23.4
P10809_1031
16.1
P10809_1050
25.7
P10809_1069
23.9
P10809_1087
23.1
P10809_1110
18.4
T-reg nTPM: 35.6
Samples: 6
Max nTPM: 54.1
Min nTPM: 17.9
P10809_1018
54.1
P10809_1037
38.5
P10809_1056
17.9
P10809_1075
26.8
P10809_1094
40.0
P10809_1106
36.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.3
Samples: 4
Max nTPM: 110.6
Min nTPM: 64.6
RHH5202_R3573
100.8
RHH5230_R3602
64.6
RHH5259_R3631
110.6
RHH5288_R3660
93.3
Effector memory CD8 T-cell nTPM: 117.2
Samples: 4
Max nTPM: 175.3
Min nTPM: 85.5
RHH5203_R3574
175.3
RHH5231_R3603
85.5
RHH5260_R3632
116.5
RHH5289_R3661
91.5
MAIT T-cell nTPM: 100.3
Samples: 4
Max nTPM: 163.2
Min nTPM: 67.5
RHH5233_R3605
83.3
RHH5205_R3576
163.2
RHH5262_R3634
87.1
RHH5297_R3663
67.5
Memory CD4 T-cell TFH nTPM: 123.5
Samples: 4
Max nTPM: 210.5
Min nTPM: 60.7
RHH5300_R3666
93.8
RHH5236_R3608
60.7
RHH5265_R3637
128.9
RHH5208_R3579
210.5
Memory CD4 T-cell Th1 nTPM: 115.0
Samples: 4
Max nTPM: 134.3
Min nTPM: 89.4
RHH5210_R3581
129.9
RHH5302_R3668
89.4
RHH5238_R3610
134.3
RHH5267_R3639
106.4
Memory CD4 T-cell Th1/Th17 nTPM: 116.8
Samples: 4
Max nTPM: 152.5
Min nTPM: 86.6
RHH5303_R3669
91.1
RHH5211_R3582
152.5
RHH5239_R3611
137.0
RHH5268_R3640
86.6
Memory CD4 T-cell Th17 nTPM: 119.6
Samples: 4
Max nTPM: 159.8
Min nTPM: 102.1
RHH5304_R3670
102.1
RHH5212_R3583
159.8
RHH5240_R3612
105.1
RHH5269_R3641
111.3
Memory CD4 T-cell Th2 nTPM: 111.7
Samples: 4
Max nTPM: 158.4
Min nTPM: 73.0
RHH5305_R3671
90.4
RHH5213_R3584
158.4
RHH5241_R3613
73.0
RHH5270_R3642
125.1
Naive CD4 T-cell nTPM: 77.3
Samples: 4
Max nTPM: 101.4
Min nTPM: 58.2
RHH5306_R3672
65.9
RHH5214_R3585
101.4
RHH5242_R3614
58.2
RHH5271_R3643
83.8
Naive CD8 T-cell nTPM: 69.1
Samples: 4
Max nTPM: 91.6
Min nTPM: 44.9
RHH5201_R3572
91.6
RHH5229_R3601
44.9
RHH5258_R3630
73.5
RHH5287_R3659
66.3
Non-Vd2 gdTCR nTPM: 100.1
Samples: 4
Max nTPM: 145.0
Min nTPM: 75.4
RHH5235_R3607
93.0
RHH5264_R3636
87.0
RHH5207_R3578
145.0
RHH5299_R3665
75.4
T-reg nTPM: 114.2
Samples: 4
Max nTPM: 155.3
Min nTPM: 73.0
RHH5301_R3667
98.6
RHH5237_R3609
73.0
RHH5266_R3638
129.7
RHH5209_R3580
155.3
Terminal effector memory CD4 T-cell nTPM: 75.0
Samples: 2
Max nTPM: 80.0
Min nTPM: 70.0
RHH5243_R3615
70.0
RHH5272_R3644
80.0
Terminal effector memory CD8 T-cell nTPM: 84.0
Samples: 4
Max nTPM: 107.9
Min nTPM: 51.0
RHH5232_R3604
51.0
RHH5204_R3575
96.3
RHH5261_R3633
107.9
RHH5296_R3662
80.8
Vd2 gdTCR nTPM: 72.1
Samples: 4
Max nTPM: 80.4
Min nTPM: 62.3
RHH5234_R3606
62.3
RHH5206_R3577
80.4
RHH5263_R3635
76.0
RHH5298_R3664
69.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
