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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
5605.3
nTPM
Monaco:
3677.6
nTPM
Schmiedel:
2871.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5605.3
HPA sample
nTPM
gdT-cell nTPM: 2737.6
Samples: 6
Max nTPM: 3323.9
Min nTPM: 1811.0
P10809_1007
1811.0
P10809_1022
3323.9
P10809_1041
3282.2
P10809_1060
2598.3
P10809_1077
2881.4
P10809_1098
2529.0
MAIT T-cell nTPM: 2700.4
Samples: 6
Max nTPM: 3242.9
Min nTPM: 1820.2
P10809_1006
1820.2
P10809_1024
3242.9
P10809_1043
2840.6
P10809_1062
2864.7
P10809_1083
2670.1
P10809_1097
2763.9
Memory CD4 T-cell nTPM: 3108.5
Samples: 6
Max nTPM: 3470.3
Min nTPM: 2272.0
P10809_1014
2272.0
P10809_1026
3470.3
P10809_1045
3377.2
P10809_1064
3293.2
P10809_1086
3247.4
P10809_1113
2990.9
Memory CD8 T-cell nTPM: 3090.2
Samples: 5
Max nTPM: 3585.9
Min nTPM: 2231.1
P10809_1012
2231.1
P10809_1027
3527.1
P10809_1046
3143.3
P10809_1065
3585.9
P10809_1111
2963.7
Naive CD4 T-cell nTPM: 2995.2
Samples: 6
Max nTPM: 3800.3
Min nTPM: 2005.1
P10809_1015
2005.1
P10809_1030
3196.8
P10809_1049
3800.3
P10809_1068
3122.9
P10809_1085
3047.3
P10809_1112
2798.6
Naive CD8 T-cell nTPM: 3129.9
Samples: 6
Max nTPM: 3681.9
Min nTPM: 2201.3
P10809_1016
2201.3
P10809_1031
3579.3
P10809_1050
3238.5
P10809_1069
3681.9
P10809_1087
3113.8
P10809_1110
2964.5
T-reg nTPM: 5605.3
Samples: 6
Max nTPM: 6909.9
Min nTPM: 3829.8
P10809_1018
3829.8
P10809_1037
5747.4
P10809_1056
6909.9
P10809_1075
5366.1
P10809_1094
5857.5
P10809_1106
5920.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3677.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2666.6
Samples: 4
Max nTPM: 3653.1
Min nTPM: 1526.2
RHH5202_R3573
3483.8
RHH5230_R3602
2003.1
RHH5259_R3631
1526.2
RHH5288_R3660
3653.1
Effector memory CD8 T-cell nTPM: 2941.6
Samples: 4
Max nTPM: 3650.4
Min nTPM: 1787.8
RHH5203_R3574
3650.4
RHH5231_R3603
3516.4
RHH5260_R3632
1787.8
RHH5289_R3661
2811.8
MAIT T-cell nTPM: 2525.8
Samples: 4
Max nTPM: 3340.7
Min nTPM: 1596.7
RHH5233_R3605
3340.7
RHH5205_R3576
1596.7
RHH5262_R3634
2265.9
RHH5297_R3663
2900.0
Memory CD4 T-cell TFH nTPM: 3677.6
Samples: 4
Max nTPM: 5122.3
Min nTPM: 2792.4
RHH5300_R3666
3210.3
RHH5236_R3608
5122.3
RHH5265_R3637
2792.4
RHH5208_R3579
3585.4
Memory CD4 T-cell Th1 nTPM: 2691.5
Samples: 4
Max nTPM: 3920.1
Min nTPM: 1897.3
RHH5210_R3581
2993.6
RHH5302_R3668
3920.1
RHH5238_R3610
1955.1
RHH5267_R3639
1897.3
Memory CD4 T-cell Th1/Th17 nTPM: 2836.9
Samples: 4
Max nTPM: 4289.3
Min nTPM: 1362.6
RHH5303_R3669
4289.3
RHH5211_R3582
3843.1
RHH5239_R3611
1362.6
RHH5268_R3640
1852.7
Memory CD4 T-cell Th17 nTPM: 2018.4
Samples: 4
Max nTPM: 2852.9
Min nTPM: 1443.2
RHH5304_R3670
2107.4
RHH5212_R3583
2852.9
RHH5240_R3612
1669.9
RHH5269_R3641
1443.2
Memory CD4 T-cell Th2 nTPM: 2845.8
Samples: 4
Max nTPM: 3848.1
Min nTPM: 2090.3
RHH5305_R3671
2763.7
RHH5213_R3584
2681.0
RHH5241_R3613
3848.1
RHH5270_R3642
2090.3
Naive CD4 T-cell nTPM: 2573.6
Samples: 4
Max nTPM: 3398.0
Min nTPM: 1685.2
RHH5306_R3672
2717.0
RHH5214_R3585
3398.0
RHH5242_R3614
2494.1
RHH5271_R3643
1685.2
Naive CD8 T-cell nTPM: 2547.2
Samples: 4
Max nTPM: 3340.2
Min nTPM: 1370.2
RHH5201_R3572
3340.2
RHH5229_R3601
1370.2
RHH5258_R3630
3037.4
RHH5287_R3659
2441.1
Non-Vd2 gdTCR nTPM: 2886.2
Samples: 4
Max nTPM: 3723.5
Min nTPM: 1510.9
RHH5235_R3607
1510.9
RHH5264_R3636
3723.5
RHH5207_R3578
2729.1
RHH5299_R3665
3581.2
T-reg nTPM: 3137.1
Samples: 4
Max nTPM: 4595.9
Min nTPM: 1843.6
RHH5301_R3667
3604.8
RHH5237_R3609
4595.9
RHH5266_R3638
1843.6
RHH5209_R3580
2504.1
Terminal effector memory CD4 T-cell nTPM: 2262.1
Samples: 2
Max nTPM: 3134.3
Min nTPM: 1389.9
RHH5243_R3615
1389.9
RHH5272_R3644
3134.3
Terminal effector memory CD8 T-cell nTPM: 3156.0
Samples: 4
Max nTPM: 3759.7
Min nTPM: 2034.2
RHH5232_R3604
3256.6
RHH5204_R3575
3759.7
RHH5261_R3633
2034.2
RHH5296_R3662
3573.6
Vd2 gdTCR nTPM: 2792.9
Samples: 4
Max nTPM: 3665.8
Min nTPM: 1822.0
RHH5234_R3606
2824.8
RHH5206_R3577
3665.8
RHH5263_R3635
1822.0
RHH5298_R3664
2859.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.