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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.1
nTPM
Monaco:
559.6
nTPM
Schmiedel:
503.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.1
HPA sample
nTPM
gdT-cell nTPM: 51.8
Samples: 6
Max nTPM: 64.8
Min nTPM: 40.7
P10809_1007
42.7
P10809_1022
61.5
P10809_1041
40.7
P10809_1060
64.8
P10809_1077
55.2
P10809_1098
46.1
MAIT T-cell nTPM: 71.2
Samples: 6
Max nTPM: 88.7
Min nTPM: 42.7
P10809_1006
88.7
P10809_1024
74.2
P10809_1043
62.7
P10809_1062
86.7
P10809_1083
72.0
P10809_1097
42.7
Memory CD4 T-cell nTPM: 54.3
Samples: 6
Max nTPM: 61.8
Min nTPM: 49.4
P10809_1014
54.6
P10809_1026
49.8
P10809_1045
49.4
P10809_1064
61.8
P10809_1086
59.4
P10809_1113
50.6
Memory CD8 T-cell nTPM: 60.9
Samples: 5
Max nTPM: 68.9
Min nTPM: 55.5
P10809_1012
59.4
P10809_1027
59.0
P10809_1046
61.9
P10809_1065
68.9
P10809_1111
55.5
Naive CD4 T-cell nTPM: 62.8
Samples: 6
Max nTPM: 72.7
Min nTPM: 50.8
P10809_1015
66.9
P10809_1030
60.0
P10809_1049
62.4
P10809_1068
72.7
P10809_1085
63.7
P10809_1112
50.8
Naive CD8 T-cell nTPM: 57.2
Samples: 6
Max nTPM: 68.7
Min nTPM: 48.4
P10809_1016
58.9
P10809_1031
54.9
P10809_1050
57.2
P10809_1069
68.7
P10809_1087
48.4
P10809_1110
55.1
T-reg nTPM: 63.6
Samples: 6
Max nTPM: 90.0
Min nTPM: 41.0
P10809_1018
61.3
P10809_1037
65.3
P10809_1056
45.9
P10809_1075
78.2
P10809_1094
90.0
P10809_1106
41.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
559.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 557.0
Samples: 4
Max nTPM: 595.0
Min nTPM: 469.9
RHH5202_R3573
595.0
RHH5230_R3602
469.9
RHH5259_R3631
589.2
RHH5288_R3660
573.8
Effector memory CD8 T-cell nTPM: 465.0
Samples: 4
Max nTPM: 551.0
Min nTPM: 370.1
RHH5203_R3574
551.0
RHH5231_R3603
370.1
RHH5260_R3632
508.2
RHH5289_R3661
430.7
MAIT T-cell nTPM: 448.7
Samples: 4
Max nTPM: 575.6
Min nTPM: 383.7
RHH5233_R3605
442.3
RHH5205_R3576
575.6
RHH5262_R3634
393.2
RHH5297_R3663
383.7
Memory CD4 T-cell TFH nTPM: 440.3
Samples: 4
Max nTPM: 542.0
Min nTPM: 350.3
RHH5300_R3666
400.1
RHH5236_R3608
350.3
RHH5265_R3637
468.9
RHH5208_R3579
542.0
Memory CD4 T-cell Th1 nTPM: 482.9
Samples: 4
Max nTPM: 546.5
Min nTPM: 410.3
RHH5210_R3581
491.2
RHH5302_R3668
410.3
RHH5238_R3610
546.5
RHH5267_R3639
483.5
Memory CD4 T-cell Th1/Th17 nTPM: 470.4
Samples: 4
Max nTPM: 578.5
Min nTPM: 394.4
RHH5303_R3669
478.2
RHH5211_R3582
394.4
RHH5239_R3611
578.5
RHH5268_R3640
430.3
Memory CD4 T-cell Th17 nTPM: 447.7
Samples: 4
Max nTPM: 478.8
Min nTPM: 404.0
RHH5304_R3670
462.3
RHH5212_R3583
404.0
RHH5240_R3612
478.8
RHH5269_R3641
445.8
Memory CD4 T-cell Th2 nTPM: 475.0
Samples: 4
Max nTPM: 531.2
Min nTPM: 428.3
RHH5305_R3671
443.2
RHH5213_R3584
531.2
RHH5241_R3613
497.3
RHH5270_R3642
428.3
Naive CD4 T-cell nTPM: 459.3
Samples: 4
Max nTPM: 486.7
Min nTPM: 423.6
RHH5306_R3672
454.9
RHH5214_R3585
423.6
RHH5242_R3614
486.7
RHH5271_R3643
472.0
Naive CD8 T-cell nTPM: 559.6
Samples: 4
Max nTPM: 649.2
Min nTPM: 495.7
RHH5201_R3572
649.2
RHH5229_R3601
508.4
RHH5258_R3630
495.7
RHH5287_R3659
584.9
Non-Vd2 gdTCR nTPM: 429.0
Samples: 4
Max nTPM: 482.5
Min nTPM: 342.8
RHH5235_R3607
454.7
RHH5264_R3636
436.0
RHH5207_R3578
482.5
RHH5299_R3665
342.8
T-reg nTPM: 459.4
Samples: 4
Max nTPM: 524.9
Min nTPM: 387.2
RHH5301_R3667
405.9
RHH5237_R3609
387.2
RHH5266_R3638
524.9
RHH5209_R3580
519.5
Terminal effector memory CD4 T-cell nTPM: 433.2
Samples: 2
Max nTPM: 447.0
Min nTPM: 419.4
RHH5243_R3615
447.0
RHH5272_R3644
419.4
Terminal effector memory CD8 T-cell nTPM: 446.9
Samples: 4
Max nTPM: 500.3
Min nTPM: 416.4
RHH5232_R3604
449.4
RHH5204_R3575
421.4
RHH5261_R3633
500.3
RHH5296_R3662
416.4
Vd2 gdTCR nTPM: 470.6
Samples: 4
Max nTPM: 601.2
Min nTPM: 385.4
RHH5234_R3606
461.8
RHH5206_R3577
434.0
RHH5263_R3635
601.2
RHH5298_R3664
385.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
