HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:9.2 nTPM
HPA Brain:22.7 nTPM
GTEx:9.2 nTPM
FANTOM5:21.6 Scaled Tags Per Million
Pig:15.0 nTPM
Mouse:10.1 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026905
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
1898 Male, age 80, left hemisphere 24.7
2148 Female, age 91, left hemisphere 23.1
2529 Female, age 94, left hemisphere 19.6
1855 Male, age 76, left hemisphere 19.4
1911 Female, age 85, right hemisphere 18.7
2621 Female, age 67, right hemisphere 17.9
Dentate gyrus
nTPM: 19.2
1927 Female, age 91, both hemispheres 23.6
2010 Male, age 76, both hemispheres 20.5
2528 Male, age 74, both hemispheres 19.8
2530 Female, age 94, left hemisphere 17.4
2531 Female, age 67, both hemispheres 17.3
2246 Female, age 85, both hemispheres 16.7
Entorhinal gyrus
nTPM: 22.1
2686 Male, age 75, right hemisphere 28.2
2613 Female, age 94, left hemisphere 23.6
2764 Male, age 80, right hemisphere 21.2
1938 Female, age 85, left hemisphere 21.1
2117 Female, age 91, right hemisphere 19.4
1787 Male, age 76, left hemisphere 19.0
Hippocampus, CA1
nTPM: 21.7
2749 Male, age 80, left hemisphere 25.4
2082 Female, age 91, right hemisphere 21.3
1873 Female, age 85, both hemispheres 21.2
2045 Male, age 76, both hemispheres 20.3
2527 Male, age 74, both hemispheres 20.3
Hippocampus, CA2
nTPM: 22.2
1963 Male, age 80, left hemisphere 31.5
1892 Male, age 76, both hemispheres 23.3
2437 Female, age 94, left hemisphere 20.5
2249 Male, age 74, both hemispheres 19.8
2113 Female, age 91, right hemisphere 19.2
1940 Female, age 85, left hemisphere 19.0
Hippocampus, CA3
nTPM: 22.7
2861 Female, age 67, both hemispheres 26.0
1867 Male, age 76, both hemispheres 25.4
2137 Male, age 80, left hemisphere 25.0
2436 Male, age 74, both hemispheres 20.8
2620 Female, age 94, left hemisphere 20.0
1891 Female, age 85, both hemispheres 18.7
Parahippocampal cortex
nTPM: 21.5
1933 Female, age 85, both hemispheres 24.5
2692 Male, age 74, both hemispheres 24.2
2018 Male, age 76, both hemispheres 23.4
1850 Male, age 80, both hemispheres 23.0
1990 Female, age 91, right hemisphere 21.7
2250 Female, age 67, right hemisphere 20.6
2622 Female, age 67, right hemisphere 20.3
2532 Female, age 72, left hemisphere 19.4
2693 Female, age 94, both hemispheres 19.1
2245 Female, age 91, both hemispheres 18.6
Perirhinal gyrus
nTPM: 20.6
1847 Female, age 91, left hemisphere 24.6
2521 Female, age 94, right hemisphere 21.0
1841 Female, age 85, right hemisphere 20.3
1794 Male, age 80, right hemisphere 19.5
2848 Male, age 76, right hemisphere 17.3
Subiculum
nTPM: 21.2
1901 Male, age 80, both hemispheres 24.1
2042 Male, age 76, both hemispheres 23.6
2619 Male, age 74, both hemispheres 22.2
2729 Female, age 91, right hemisphere 21.7
1977 Female, age 85, both hemispheres 20.3
2438 Female, age 94, left hemisphere 15.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.2
Samples: 197

Max nTPM: 23.0
Min nTPM: 4.7
Std nTPM: 2.6
Median nTPM: 8.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 23.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 16.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 16.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 15.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 15.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 14.5
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 14.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 14.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.6
FF:10169-103B7 60 years, female 21.8
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.0
Pig sample Sample description nTPM
Subiculum
nTPM: 15.0
Samples: 4

Max nTPM: 16.2
Min nTPM: 14.1
Sample A Female 16.2
Sample B Female 14.7
Sample C Male 14.8
Sample D Male 14.1
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 12.7
Sample A Female 13.7
Sample B Female 13.0
Sample C Male 13.7
Sample D Male 12.7
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 14.8
Sample C Male 17.1
Sample D Male 14.6
Ventral hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.6
Sample A Female 12.6
Sample B Female 13.1
Sample C Male 14.6
Sample D Male 11.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 10.6
Min nTPM: 9.7
Sample A Male 9.9
Sample B Male 10.6
Sample C Female 9.7
Sample D Female 10.2
Hippocampal formation
nTPM: 9.7
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.9
Sample A Male 8.9
Sample B Male 10.7
Sample C Female 9.5
Sample D Female 9.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
69202711 Antisense, RP_050324_04_C03, Mouse strain C57BL/6J (56 days, male) 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org