HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		142.241
Protein expressioni No data
RNA expressioni
Consensus:11.1 nTPM
HPA Brain:1.7 nTPM
GTEx:11.1 nTPM
FANTOM5:25.9 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:7.2 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069176
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079007
Hippocampal formation mean intensity 142.241
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 106.504
Molecular layer of the dentate gyrus 87.921
Granular dentate gyrus 44.132
CA1 - oriens layer 91.524
CA1 - pyramidal layer 69.858
CA1 - radiatum layer 94.654
CA2 - oriens layer 94.321
CA2 - pyramidal layer 78.731
CA2 - radiatum layer 99.788
CA3 - oriens layer 95.949
CA3 - pyramidal layer 74.779
CA3 - radiatum layer 97.745
Stratum lucidum 119.778
Lacunosum moleculare 80.399
Subiculum 69.637

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1.5
1855 Male, age 76, left hemisphere 1.9
2529 Female, age 94, left hemisphere 1.7
1898 Male, age 80, left hemisphere 1.6
1911 Female, age 85, right hemisphere 1.3
2148 Female, age 91, left hemisphere 1.1
2621 Female, age 67, right hemisphere 1.1
Dentate gyrus
nTPM: 1.7
2010 Male, age 76, both hemispheres 2.5
2530 Female, age 94, left hemisphere 1.9
2246 Female, age 85, both hemispheres 1.8
1927 Female, age 91, both hemispheres 1.5
2528 Male, age 74, both hemispheres 1.5
2531 Female, age 67, both hemispheres 1.1
Entorhinal gyrus
nTPM: 1.0
1938 Female, age 85, left hemisphere 1.5
2613 Female, age 94, left hemisphere 1.4
1787 Male, age 76, left hemisphere 1.1
2117 Female, age 91, right hemisphere 0.8
2764 Male, age 80, right hemisphere 0.6
2686 Male, age 75, right hemisphere 0.5
Hippocampus, CA1
nTPM: 1.6
2749 Male, age 80, left hemisphere 2.3
2045 Male, age 76, both hemispheres 1.9
2082 Female, age 91, right hemisphere 1.3
2527 Male, age 74, both hemispheres 1.3
1873 Female, age 85, both hemispheres 1.0
Hippocampus, CA2
nTPM: 1.6
1940 Female, age 85, left hemisphere 2.3
1892 Male, age 76, both hemispheres 2.1
1963 Male, age 80, left hemisphere 1.7
2249 Male, age 74, both hemispheres 1.6
2113 Female, age 91, right hemisphere 1.3
2437 Female, age 94, left hemisphere 0.6
Hippocampus, CA3
nTPM: 1.7
2436 Male, age 74, both hemispheres 2.9
1867 Male, age 76, both hemispheres 2.4
2137 Male, age 80, left hemisphere 1.8
2861 Female, age 67, both hemispheres 1.7
1891 Female, age 85, both hemispheres 0.8
2620 Female, age 94, left hemisphere 0.4
Parahippocampal cortex
nTPM: 1.1
2250 Female, age 67, right hemisphere 1.6
1933 Female, age 85, both hemispheres 1.4
1990 Female, age 91, right hemisphere 1.4
1850 Male, age 80, both hemispheres 1.3
2692 Male, age 74, both hemispheres 1.3
2018 Male, age 76, both hemispheres 0.9
2245 Female, age 91, both hemispheres 0.8
2532 Female, age 72, left hemisphere 0.8
2622 Female, age 67, right hemisphere 0.7
2693 Female, age 94, both hemispheres 0.7
Perirhinal gyrus
nTPM: 1.3
1794 Male, age 80, right hemisphere 2.1
2521 Female, age 94, right hemisphere 1.1
2848 Male, age 76, right hemisphere 1.1
1847 Female, age 91, left hemisphere 1.0
1841 Female, age 85, right hemisphere 0.9
Subiculum
nTPM: 1.3
1901 Male, age 80, both hemispheres 2.4
2729 Female, age 91, right hemisphere 2.1
1977 Female, age 85, both hemispheres 1.1
2042 Male, age 76, both hemispheres 0.9
2619 Male, age 74, both hemispheres 0.9
2438 Female, age 94, left hemisphere 0.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 23.6
Min nTPM: 6.0
Std nTPM: 2.6
Median nTPM: 10.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 18.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 18.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 17.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 17.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 16.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 16.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 16.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 16.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 16.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.9
FF:10153-102I9 76 years, female 29.0
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 11.6
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 11.4
Sample C Male 10.8
Sample D Male 11.6
Dorsal hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.6
Sample A Female 11.9
Sample B Female 9.6
Sample C Male 12.4
Sample D Male 10.2
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.8
Sample A Female 7.8
Sample B Female 9.1
Sample C Male 8.8
Sample D Male 9.4
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 11.9
Min nTPM: 10.1
Sample A Female 11.9
Sample B Female 11.5
Sample C Male 10.1
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.7
Sample A Male 7.0
Sample B Male 6.5
Sample C Female 6.4
Sample D Female 4.7
Hippocampal formation
nTPM: 7.2
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.2
Sample A Male 6.2
Sample B Male 7.0
Sample C Female 8.5
Sample D Female 7.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68797504 Antisense, RP_050210_02_C08, Mouse strain C57BL/6J (56 days, male) 0.5

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