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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.4
nTPM
Monaco:
54.7
nTPM
Schmiedel:
74.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.4
HPA sample
nTPM
gdT-cell nTPM: 14.0
Samples: 6
Max nTPM: 16.0
Min nTPM: 9.8
P10809_1007
15.3
P10809_1022
13.0
P10809_1041
16.0
P10809_1060
9.8
P10809_1077
14.0
P10809_1098
15.9
MAIT T-cell nTPM: 17.0
Samples: 6
Max nTPM: 22.4
Min nTPM: 13.0
P10809_1006
22.4
P10809_1024
18.2
P10809_1043
13.0
P10809_1062
13.2
P10809_1083
13.8
P10809_1097
21.4
Memory CD4 T-cell nTPM: 16.9
Samples: 6
Max nTPM: 23.6
Min nTPM: 12.3
P10809_1014
19.9
P10809_1026
13.6
P10809_1045
23.6
P10809_1064
16.3
P10809_1086
15.7
P10809_1113
12.3
Memory CD8 T-cell nTPM: 15.3
Samples: 5
Max nTPM: 18.1
Min nTPM: 8.3
P10809_1012
17.7
P10809_1027
8.3
P10809_1046
17.0
P10809_1065
15.6
P10809_1111
18.1
Naive CD4 T-cell nTPM: 17.8
Samples: 6
Max nTPM: 22.2
Min nTPM: 12.3
P10809_1015
18.2
P10809_1030
16.7
P10809_1049
18.5
P10809_1068
18.8
P10809_1085
22.2
P10809_1112
12.3
Naive CD8 T-cell nTPM: 15.0
Samples: 6
Max nTPM: 21.6
Min nTPM: 8.3
P10809_1016
12.7
P10809_1031
8.3
P10809_1050
15.0
P10809_1069
21.6
P10809_1087
17.7
P10809_1110
14.5
T-reg nTPM: 19.4
Samples: 6
Max nTPM: 21.6
Min nTPM: 14.7
P10809_1018
21.3
P10809_1037
21.4
P10809_1056
14.7
P10809_1075
18.8
P10809_1094
21.6
P10809_1106
18.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 45.9
Samples: 4
Max nTPM: 51.6
Min nTPM: 39.4
RHH5202_R3573
39.4
RHH5230_R3602
47.5
RHH5259_R3631
51.6
RHH5288_R3660
44.9
Effector memory CD8 T-cell nTPM: 52.4
Samples: 4
Max nTPM: 67.3
Min nTPM: 42.9
RHH5203_R3574
42.9
RHH5231_R3603
51.5
RHH5260_R3632
67.3
RHH5289_R3661
47.9
MAIT T-cell nTPM: 36.7
Samples: 4
Max nTPM: 44.8
Min nTPM: 30.1
RHH5233_R3605
40.5
RHH5205_R3576
30.1
RHH5262_R3634
44.8
RHH5297_R3663
31.2
Memory CD4 T-cell TFH nTPM: 48.6
Samples: 4
Max nTPM: 58.2
Min nTPM: 31.7
RHH5300_R3666
48.3
RHH5236_R3608
58.2
RHH5265_R3637
56.2
RHH5208_R3579
31.7
Memory CD4 T-cell Th1 nTPM: 49.5
Samples: 4
Max nTPM: 58.3
Min nTPM: 34.4
RHH5210_R3581
34.4
RHH5302_R3668
48.3
RHH5238_R3610
57.1
RHH5267_R3639
58.3
Memory CD4 T-cell Th1/Th17 nTPM: 43.6
Samples: 4
Max nTPM: 52.2
Min nTPM: 32.4
RHH5303_R3669
32.4
RHH5211_R3582
39.9
RHH5239_R3611
52.2
RHH5268_R3640
49.9
Memory CD4 T-cell Th17 nTPM: 42.3
Samples: 4
Max nTPM: 58.5
Min nTPM: 27.0
RHH5304_R3670
35.7
RHH5212_R3583
47.9
RHH5240_R3612
27.0
RHH5269_R3641
58.5
Memory CD4 T-cell Th2 nTPM: 51.2
Samples: 4
Max nTPM: 70.4
Min nTPM: 27.6
RHH5305_R3671
49.2
RHH5213_R3584
57.5
RHH5241_R3613
27.6
RHH5270_R3642
70.4
Naive CD4 T-cell nTPM: 50.3
Samples: 4
Max nTPM: 59.8
Min nTPM: 37.0
RHH5306_R3672
49.6
RHH5214_R3585
59.8
RHH5242_R3614
37.0
RHH5271_R3643
54.7
Naive CD8 T-cell nTPM: 44.8
Samples: 4
Max nTPM: 51.1
Min nTPM: 35.1
RHH5201_R3572
35.1
RHH5229_R3601
51.1
RHH5258_R3630
42.5
RHH5287_R3659
50.3
Non-Vd2 gdTCR nTPM: 42.4
Samples: 4
Max nTPM: 46.8
Min nTPM: 39.1
RHH5235_R3607
39.2
RHH5264_R3636
46.8
RHH5207_R3578
39.1
RHH5299_R3665
44.6
T-reg nTPM: 54.8
Samples: 4
Max nTPM: 66.1
Min nTPM: 44.9
RHH5301_R3667
44.9
RHH5237_R3609
66.1
RHH5266_R3638
59.4
RHH5209_R3580
48.7
Terminal effector memory CD4 T-cell nTPM: 46.3
Samples: 2
Max nTPM: 50.6
Min nTPM: 41.9
RHH5243_R3615
41.9
RHH5272_R3644
50.6
Terminal effector memory CD8 T-cell nTPM: 42.2
Samples: 4
Max nTPM: 53.0
Min nTPM: 33.2
RHH5232_R3604
42.1
RHH5204_R3575
33.2
RHH5261_R3633
53.0
RHH5296_R3662
40.4
Vd2 gdTCR nTPM: 39.0
Samples: 4
Max nTPM: 44.1
Min nTPM: 34.8
RHH5234_R3606
34.8
RHH5206_R3577
39.0
RHH5263_R3635
44.1
RHH5298_R3664
38.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
