HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:68.4 nTPM
HPA Brain:101.6 nTPM
GTEx:68.4 nTPM
FANTOM5:150.4 Scaled Tags Per Million
Pig:265.4 nTPM
Mouse:106.7 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010224
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.6
Sample id Sample description nTPM
Hippocampus
nTPM: 89.3
1898 Male, age 80, left hemisphere 98.5
1911 Female, age 85, right hemisphere 91.1
2529 Female, age 94, left hemisphere 91.1
1855 Male, age 76, left hemisphere 87.0
2148 Female, age 91, left hemisphere 85.0
2621 Female, age 67, right hemisphere 82.9
Dentate gyrus
nTPM: 92.2
2530 Female, age 94, left hemisphere 115.1
2010 Male, age 76, both hemispheres 94.1
2246 Female, age 85, both hemispheres 91.6
2528 Male, age 74, both hemispheres 89.7
2531 Female, age 67, both hemispheres 81.4
1927 Female, age 91, both hemispheres 81.1
Entorhinal gyrus
nTPM: 94.1
2117 Female, age 91, right hemisphere 109.2
1938 Female, age 85, left hemisphere 100.5
2764 Male, age 80, right hemisphere 99.0
1787 Male, age 76, left hemisphere 95.1
2613 Female, age 94, left hemisphere 83.2
2686 Male, age 75, right hemisphere 77.8
Hippocampus, CA1
nTPM: 91.4
2749 Male, age 80, left hemisphere 123.5
2527 Male, age 74, both hemispheres 96.1
2082 Female, age 91, right hemisphere 86.4
1873 Female, age 85, both hemispheres 84.1
2045 Male, age 76, both hemispheres 67.1
Hippocampus, CA2
nTPM: 99.3
2249 Male, age 74, both hemispheres 108.7
1963 Male, age 80, left hemisphere 108.6
2437 Female, age 94, left hemisphere 102.9
1892 Male, age 76, both hemispheres 93.4
2113 Female, age 91, right hemisphere 92.2
1940 Female, age 85, left hemisphere 90.3
Hippocampus, CA3
nTPM: 87.0
2137 Male, age 80, left hemisphere 101.4
1891 Female, age 85, both hemispheres 92.4
1867 Male, age 76, both hemispheres 87.7
2436 Male, age 74, both hemispheres 85.0
2620 Female, age 94, left hemisphere 79.6
2861 Female, age 67, both hemispheres 76.0
Parahippocampal cortex
nTPM: 89.1
1850 Male, age 80, both hemispheres 106.7
1933 Female, age 85, both hemispheres 99.6
2532 Female, age 72, left hemisphere 99.5
1990 Female, age 91, right hemisphere 95.6
2250 Female, age 67, right hemisphere 92.1
2245 Female, age 91, both hemispheres 87.7
2018 Male, age 76, both hemispheres 83.1
2693 Female, age 94, both hemispheres 79.7
2692 Male, age 74, both hemispheres 75.9
2622 Female, age 67, right hemisphere 70.6
Perirhinal gyrus
nTPM: 101.6
1794 Male, age 80, right hemisphere 116.0
1847 Female, age 91, left hemisphere 101.7
1841 Female, age 85, right hemisphere 99.8
2521 Female, age 94, right hemisphere 99.5
2848 Male, age 76, right hemisphere 91.0
Subiculum
nTPM: 95.6
1977 Female, age 85, both hemispheres 110.8
2438 Female, age 94, left hemisphere 107.0
1901 Male, age 80, both hemispheres 97.0
2619 Male, age 74, both hemispheres 93.0
2729 Female, age 91, right hemisphere 87.4
2042 Male, age 76, both hemispheres 78.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.4
Samples: 197

Max nTPM: 107.2
Min nTPM: 18.9
Std nTPM: 17.1
Median nTPM: 68.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 107.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 107.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 107.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 106.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 103.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 100.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 98.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 97.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 97.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 97.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 95.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 150.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 150.4
FF:10153-102I9 76 years, female 173.1
FF:10169-103B7 60 years, female 127.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 265.4
Pig sample Sample description nTPM
Subiculum
nTPM: 238.0
Samples: 4

Max nTPM: 288.2
Min nTPM: 214.7
Sample A Female 288.2
Sample B Female 227.4
Sample C Male 221.7
Sample D Male 214.7
Dorsal hippocampus
nTPM: 265.4
Samples: 4

Max nTPM: 319.6
Min nTPM: 183.0
Sample A Female 319.6
Sample B Female 259.1
Sample C Male 299.8
Sample D Male 183.0
Entorhinal cortex
nTPM: 243.4
Samples: 4

Max nTPM: 281.7
Min nTPM: 208.7
Sample A Female 246.7
Sample B Female 281.7
Sample C Male 236.3
Sample D Male 208.7
Ventral hippocampus
nTPM: 253.0
Samples: 4

Max nTPM: 297.2
Min nTPM: 197.0
Sample A Female 264.5
Sample B Female 197.0
Sample C Male 297.2
Sample D Male 253.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.9
Samples: 4

Max nTPM: 108.6
Min nTPM: 98.0
Sample A Male 98.0
Sample B Male 98.6
Sample C Female 106.5
Sample D Female 108.6
Hippocampal formation
nTPM: 106.8
Samples: 4

Max nTPM: 114.6
Min nTPM: 101.2
Sample A Male 114.6
Sample B Male 101.2
Sample C Female 108.6
Sample D Female 102.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
100144441 Antisense, RP_110407_02_B12, Mouse strain C57BL/6J (56 days, male) 14.1

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