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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
67.8
nTPM
Monaco:
197.7
nTPM
Schmiedel:
53.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.8
HPA sample
nTPM
gdT-cell nTPM: 50.2
Samples: 6
Max nTPM: 60.6
Min nTPM: 36.6
P10809_1007
36.6
P10809_1022
56.0
P10809_1041
60.6
P10809_1060
47.8
P10809_1077
53.2
P10809_1098
46.8
MAIT T-cell nTPM: 56.7
Samples: 6
Max nTPM: 66.6
Min nTPM: 39.5
P10809_1006
39.5
P10809_1024
66.6
P10809_1043
57.1
P10809_1062
55.6
P10809_1083
57.4
P10809_1097
64.0
Memory CD4 T-cell nTPM: 54.8
Samples: 6
Max nTPM: 78.2
Min nTPM: 45.7
P10809_1014
48.6
P10809_1026
48.9
P10809_1045
78.2
P10809_1064
49.7
P10809_1086
57.8
P10809_1113
45.7
Memory CD8 T-cell nTPM: 58.9
Samples: 5
Max nTPM: 68.3
Min nTPM: 50.5
P10809_1012
54.3
P10809_1027
62.2
P10809_1046
68.3
P10809_1065
50.5
P10809_1111
59.4
Naive CD4 T-cell nTPM: 62.8
Samples: 6
Max nTPM: 80.1
Min nTPM: 49.1
P10809_1015
63.5
P10809_1030
60.6
P10809_1049
80.1
P10809_1068
64.6
P10809_1085
49.1
P10809_1112
58.6
Naive CD8 T-cell nTPM: 67.8
Samples: 6
Max nTPM: 98.0
Min nTPM: 46.9
P10809_1016
51.8
P10809_1031
98.0
P10809_1050
83.1
P10809_1069
46.9
P10809_1087
49.6
P10809_1110
77.1
T-reg nTPM: 56.0
Samples: 6
Max nTPM: 76.2
Min nTPM: 42.1
P10809_1018
47.8
P10809_1037
61.5
P10809_1056
53.4
P10809_1075
42.1
P10809_1094
76.2
P10809_1106
54.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
197.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 173.6
Samples: 4
Max nTPM: 192.6
Min nTPM: 144.4
RHH5202_R3573
183.7
RHH5230_R3602
173.5
RHH5259_R3631
144.4
RHH5288_R3660
192.6
Effector memory CD8 T-cell nTPM: 170.7
Samples: 4
Max nTPM: 227.2
Min nTPM: 138.2
RHH5203_R3574
138.2
RHH5231_R3603
170.5
RHH5260_R3632
146.8
RHH5289_R3661
227.2
MAIT T-cell nTPM: 175.7
Samples: 4
Max nTPM: 194.0
Min nTPM: 160.6
RHH5233_R3605
194.0
RHH5205_R3576
179.4
RHH5262_R3634
160.6
RHH5297_R3663
168.9
Memory CD4 T-cell TFH nTPM: 169.6
Samples: 4
Max nTPM: 198.2
Min nTPM: 142.7
RHH5300_R3666
142.7
RHH5236_R3608
160.8
RHH5265_R3637
176.7
RHH5208_R3579
198.2
Memory CD4 T-cell Th1 nTPM: 156.2
Samples: 4
Max nTPM: 185.1
Min nTPM: 141.9
RHH5210_R3581
185.1
RHH5302_R3668
151.6
RHH5238_R3610
146.2
RHH5267_R3639
141.9
Memory CD4 T-cell Th1/Th17 nTPM: 174.8
Samples: 4
Max nTPM: 216.3
Min nTPM: 128.0
RHH5303_R3669
216.3
RHH5211_R3582
194.7
RHH5239_R3611
128.0
RHH5268_R3640
160.2
Memory CD4 T-cell Th17 nTPM: 170.3
Samples: 4
Max nTPM: 214.2
Min nTPM: 141.5
RHH5304_R3670
214.2
RHH5212_R3583
159.0
RHH5240_R3612
166.6
RHH5269_R3641
141.5
Memory CD4 T-cell Th2 nTPM: 174.4
Samples: 4
Max nTPM: 188.3
Min nTPM: 155.2
RHH5305_R3671
188.3
RHH5213_R3584
185.6
RHH5241_R3613
168.4
RHH5270_R3642
155.2
Naive CD4 T-cell nTPM: 197.7
Samples: 4
Max nTPM: 245.5
Min nTPM: 164.9
RHH5306_R3672
197.5
RHH5214_R3585
245.5
RHH5242_R3614
183.0
RHH5271_R3643
164.9
Naive CD8 T-cell nTPM: 178.2
Samples: 4
Max nTPM: 226.3
Min nTPM: 109.3
RHH5201_R3572
226.3
RHH5229_R3601
109.3
RHH5258_R3630
155.6
RHH5287_R3659
221.6
Non-Vd2 gdTCR nTPM: 181.9
Samples: 4
Max nTPM: 211.3
Min nTPM: 150.8
RHH5235_R3607
150.8
RHH5264_R3636
211.3
RHH5207_R3578
183.7
RHH5299_R3665
181.6
T-reg nTPM: 146.5
Samples: 4
Max nTPM: 167.0
Min nTPM: 123.6
RHH5301_R3667
141.3
RHH5237_R3609
167.0
RHH5266_R3638
123.6
RHH5209_R3580
154.1
Terminal effector memory CD4 T-cell nTPM: 177.2
Samples: 2
Max nTPM: 215.5
Min nTPM: 138.8
RHH5243_R3615
138.8
RHH5272_R3644
215.5
Terminal effector memory CD8 T-cell nTPM: 168.7
Samples: 4
Max nTPM: 198.9
Min nTPM: 139.3
RHH5232_R3604
189.9
RHH5204_R3575
139.3
RHH5261_R3633
146.7
RHH5296_R3662
198.9
Vd2 gdTCR nTPM: 181.9
Samples: 4
Max nTPM: 203.7
Min nTPM: 160.6
RHH5234_R3606
197.3
RHH5206_R3577
160.6
RHH5263_R3635
203.7
RHH5298_R3664
165.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
