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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
47.3
nTPM
Monaco:
135.6
nTPM
Schmiedel:
178.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.3
HPA sample
nTPM
gdT-cell nTPM: 28.0
Samples: 6
Max nTPM: 31.5
Min nTPM: 20.9
P10809_1007
20.9
P10809_1022
29.8
P10809_1041
27.2
P10809_1060
29.6
P10809_1077
31.5
P10809_1098
29.0
MAIT T-cell nTPM: 29.6
Samples: 6
Max nTPM: 37.4
Min nTPM: 23.8
P10809_1006
37.4
P10809_1024
25.0
P10809_1043
33.1
P10809_1062
31.3
P10809_1083
26.9
P10809_1097
23.8
Memory CD4 T-cell nTPM: 30.9
Samples: 6
Max nTPM: 38.4
Min nTPM: 26.3
P10809_1014
26.3
P10809_1026
26.5
P10809_1045
27.6
P10809_1064
38.4
P10809_1086
36.7
P10809_1113
30.0
Memory CD8 T-cell nTPM: 29.2
Samples: 5
Max nTPM: 32.9
Min nTPM: 26.5
P10809_1012
27.1
P10809_1027
32.9
P10809_1046
26.5
P10809_1065
29.5
P10809_1111
29.8
Naive CD4 T-cell nTPM: 23.5
Samples: 6
Max nTPM: 28.2
Min nTPM: 20.3
P10809_1015
23.1
P10809_1030
22.9
P10809_1049
21.3
P10809_1068
25.1
P10809_1085
28.2
P10809_1112
20.3
Naive CD8 T-cell nTPM: 28.3
Samples: 6
Max nTPM: 40.3
Min nTPM: 20.8
P10809_1016
22.8
P10809_1031
27.6
P10809_1050
20.8
P10809_1069
40.3
P10809_1087
33.2
P10809_1110
25.0
T-reg nTPM: 47.3
Samples: 6
Max nTPM: 55.7
Min nTPM: 36.2
P10809_1018
46.5
P10809_1037
55.7
P10809_1056
36.2
P10809_1075
54.4
P10809_1094
47.7
P10809_1106
43.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 119.8
Samples: 4
Max nTPM: 133.7
Min nTPM: 112.7
RHH5202_R3573
113.9
RHH5230_R3602
133.7
RHH5259_R3631
112.7
RHH5288_R3660
118.8
Effector memory CD8 T-cell nTPM: 126.1
Samples: 4
Max nTPM: 160.3
Min nTPM: 88.8
RHH5203_R3574
160.3
RHH5231_R3603
88.8
RHH5260_R3632
116.2
RHH5289_R3661
139.2
MAIT T-cell nTPM: 115.4
Samples: 4
Max nTPM: 134.0
Min nTPM: 100.1
RHH5233_R3605
122.3
RHH5205_R3576
134.0
RHH5262_R3634
100.1
RHH5297_R3663
105.2
Memory CD4 T-cell TFH nTPM: 114.3
Samples: 4
Max nTPM: 134.1
Min nTPM: 99.5
RHH5300_R3666
99.5
RHH5236_R3608
110.9
RHH5265_R3637
112.5
RHH5208_R3579
134.1
Memory CD4 T-cell Th1 nTPM: 108.0
Samples: 4
Max nTPM: 119.8
Min nTPM: 91.5
RHH5210_R3581
119.8
RHH5302_R3668
104.8
RHH5238_R3610
91.5
RHH5267_R3639
115.7
Memory CD4 T-cell Th1/Th17 nTPM: 106.1
Samples: 4
Max nTPM: 117.9
Min nTPM: 83.2
RHH5303_R3669
106.4
RHH5211_R3582
116.7
RHH5239_R3611
117.9
RHH5268_R3640
83.2
Memory CD4 T-cell Th17 nTPM: 135.6
Samples: 4
Max nTPM: 170.1
Min nTPM: 108.8
RHH5304_R3670
128.7
RHH5212_R3583
134.6
RHH5240_R3612
170.1
RHH5269_R3641
108.8
Memory CD4 T-cell Th2 nTPM: 107.3
Samples: 4
Max nTPM: 131.3
Min nTPM: 97.0
RHH5305_R3671
101.1
RHH5213_R3584
131.3
RHH5241_R3613
97.0
RHH5270_R3642
99.9
Naive CD4 T-cell nTPM: 97.4
Samples: 4
Max nTPM: 112.2
Min nTPM: 82.3
RHH5306_R3672
97.4
RHH5214_R3585
97.6
RHH5242_R3614
112.2
RHH5271_R3643
82.3
Naive CD8 T-cell nTPM: 82.5
Samples: 4
Max nTPM: 94.0
Min nTPM: 67.1
RHH5201_R3572
86.2
RHH5229_R3601
82.6
RHH5258_R3630
67.1
RHH5287_R3659
94.0
Non-Vd2 gdTCR nTPM: 97.1
Samples: 4
Max nTPM: 107.7
Min nTPM: 84.3
RHH5235_R3607
107.7
RHH5264_R3636
102.2
RHH5207_R3578
94.3
RHH5299_R3665
84.3
T-reg nTPM: 103.7
Samples: 4
Max nTPM: 119.3
Min nTPM: 85.9
RHH5301_R3667
85.9
RHH5237_R3609
105.7
RHH5266_R3638
103.7
RHH5209_R3580
119.3
Terminal effector memory CD4 T-cell nTPM: 81.3
Samples: 2
Max nTPM: 84.8
Min nTPM: 77.8
RHH5243_R3615
84.8
RHH5272_R3644
77.8
Terminal effector memory CD8 T-cell nTPM: 93.2
Samples: 4
Max nTPM: 103.5
Min nTPM: 88.9
RHH5232_R3604
90.0
RHH5204_R3575
90.4
RHH5261_R3633
88.9
RHH5296_R3662
103.5
Vd2 gdTCR nTPM: 90.9
Samples: 4
Max nTPM: 103.5
Min nTPM: 83.1
RHH5234_R3606
103.5
RHH5206_R3577
86.3
RHH5263_R3635
90.5
RHH5298_R3664
83.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
