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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2131.8
nTPM
Monaco:
2470.2
nTPM
Schmiedel:
621.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2131.8
HPA sample
nTPM
gdT-cell nTPM: 1328.8
Samples: 6
Max nTPM: 1773.2
Min nTPM: 1056.1
P10809_1007
1112.5
P10809_1022
1773.2
P10809_1041
1632.3
P10809_1060
1056.1
P10809_1077
1273.9
P10809_1098
1125.0
MAIT T-cell nTPM: 1173.6
Samples: 6
Max nTPM: 1296.4
Min nTPM: 986.2
P10809_1006
986.2
P10809_1024
1296.4
P10809_1043
1228.5
P10809_1062
1235.2
P10809_1083
1011.8
P10809_1097
1283.2
Memory CD4 T-cell nTPM: 1368.7
Samples: 6
Max nTPM: 1527.5
Min nTPM: 1117.1
P10809_1014
1272.3
P10809_1026
1484.8
P10809_1045
1527.5
P10809_1064
1514.6
P10809_1086
1117.1
P10809_1113
1295.8
Memory CD8 T-cell nTPM: 1333.1
Samples: 5
Max nTPM: 1518.6
Min nTPM: 1210.0
P10809_1012
1210.0
P10809_1027
1518.6
P10809_1046
1437.0
P10809_1065
1289.0
P10809_1111
1211.0
Naive CD4 T-cell nTPM: 759.9
Samples: 6
Max nTPM: 840.1
Min nTPM: 701.3
P10809_1015
722.2
P10809_1030
784.3
P10809_1049
840.1
P10809_1068
744.1
P10809_1085
767.2
P10809_1112
701.3
Naive CD8 T-cell nTPM: 889.4
Samples: 6
Max nTPM: 1172.7
Min nTPM: 690.7
P10809_1016
771.6
P10809_1031
815.0
P10809_1050
871.5
P10809_1069
1172.7
P10809_1087
1015.0
P10809_1110
690.7
T-reg nTPM: 2131.8
Samples: 6
Max nTPM: 2424.6
Min nTPM: 1853.8
P10809_1018
2117.7
P10809_1037
2250.5
P10809_1056
2424.6
P10809_1075
2106.3
P10809_1094
1853.8
P10809_1106
2037.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2470.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1585.7
Samples: 4
Max nTPM: 1985.6
Min nTPM: 934.8
RHH5202_R3573
1968.0
RHH5230_R3602
1454.3
RHH5259_R3631
934.8
RHH5288_R3660
1985.6
Effector memory CD8 T-cell nTPM: 2470.2
Samples: 4
Max nTPM: 3747.0
Min nTPM: 1435.9
RHH5203_R3574
3747.0
RHH5231_R3603
2756.2
RHH5260_R3632
1435.9
RHH5289_R3661
1941.6
MAIT T-cell nTPM: 1831.8
Samples: 4
Max nTPM: 2382.3
Min nTPM: 1272.2
RHH5233_R3605
2382.3
RHH5205_R3576
1272.2
RHH5262_R3634
1582.8
RHH5297_R3663
2089.7
Memory CD4 T-cell TFH nTPM: 1902.5
Samples: 4
Max nTPM: 2087.5
Min nTPM: 1693.2
RHH5300_R3666
2052.7
RHH5236_R3608
1693.2
RHH5265_R3637
1776.4
RHH5208_R3579
2087.5
Memory CD4 T-cell Th1 nTPM: 1737.0
Samples: 4
Max nTPM: 2590.0
Min nTPM: 1316.2
RHH5210_R3581
1670.1
RHH5302_R3668
2590.0
RHH5238_R3610
1316.2
RHH5267_R3639
1371.5
Memory CD4 T-cell Th1/Th17 nTPM: 1835.6
Samples: 4
Max nTPM: 2542.9
Min nTPM: 877.6
RHH5303_R3669
2541.8
RHH5211_R3582
2542.9
RHH5239_R3611
877.6
RHH5268_R3640
1380.1
Memory CD4 T-cell Th17 nTPM: 1501.4
Samples: 4
Max nTPM: 2134.0
Min nTPM: 1114.1
RHH5304_R3670
1603.0
RHH5212_R3583
2134.0
RHH5240_R3612
1154.5
RHH5269_R3641
1114.1
Memory CD4 T-cell Th2 nTPM: 1900.9
Samples: 4
Max nTPM: 2427.9
Min nTPM: 1586.7
RHH5305_R3671
1921.0
RHH5213_R3584
1667.8
RHH5241_R3613
2427.9
RHH5270_R3642
1586.7
Naive CD4 T-cell nTPM: 1002.2
Samples: 4
Max nTPM: 1148.7
Min nTPM: 664.0
RHH5306_R3672
1148.7
RHH5214_R3585
1068.0
RHH5242_R3614
1128.1
RHH5271_R3643
664.0
Naive CD8 T-cell nTPM: 807.1
Samples: 4
Max nTPM: 1063.8
Min nTPM: 425.3
RHH5201_R3572
1063.8
RHH5229_R3601
425.3
RHH5258_R3630
939.6
RHH5287_R3659
799.8
Non-Vd2 gdTCR nTPM: 2149.6
Samples: 4
Max nTPM: 2593.0
Min nTPM: 1375.7
RHH5235_R3607
1375.7
RHH5264_R3636
2206.2
RHH5207_R3578
2423.4
RHH5299_R3665
2593.0
T-reg nTPM: 1682.5
Samples: 4
Max nTPM: 2316.2
Min nTPM: 1218.6
RHH5301_R3667
2316.2
RHH5237_R3609
1917.8
RHH5266_R3638
1218.6
RHH5209_R3580
1277.2
Terminal effector memory CD4 T-cell nTPM: 1660.6
Samples: 2
Max nTPM: 2171.5
Min nTPM: 1149.7
RHH5243_R3615
1149.7
RHH5272_R3644
2171.5
Terminal effector memory CD8 T-cell nTPM: 2307.3
Samples: 4
Max nTPM: 2653.7
Min nTPM: 1394.4
RHH5232_R3604
2644.4
RHH5204_R3575
2536.8
RHH5261_R3633
1394.4
RHH5296_R3662
2653.7
Vd2 gdTCR nTPM: 2184.7
Samples: 4
Max nTPM: 2998.5
Min nTPM: 1303.1
RHH5234_R3606
2316.7
RHH5206_R3577
2998.5
RHH5263_R3635
1303.1
RHH5298_R3664
2120.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.