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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
413.5
nTPM
GTEx:
413.5
nTPM
FANTOM5:
93.9
Scaled Tags Per Million
Pig:
334.4
nTPM
Mouse:
277.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
413.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 413.5
Samples: 105
Max nTPM: 1554.0
Min nTPM: 62.7
Std nTPM: 219.9
Median nTPM: 0.0
218_1
71 years, female
1554.0
447_1
81 years, male
1171.5
347_1
72 years, male
945.6
350_1
84 years, female
794.3
386_1
76 years, male
759.2
6_1
73 years, female
750.5
384_1
83 years, male
723.6
379_1
60 years, male
671.7
322_1
76 years, male
662.4
41_1
94 years, female
655.2
173_1
67 years, male
652.2
237_1
82 years, male
649.1
319_1
81 years, male
648.7
293_1
68 years, female
641.8
317_1
60 years, male
635.9
321_1
62 years, female
623.2
375_1
74 years, female
615.1
307_1
66 years, female
583.8
163_1
78 years, male
574.1
351_1
91 years, male
571.3
145_1
84 years, male
564.6
349_1
83 years, male
556.1
316_1
62 years, male
553.4
177_1
74 years, male
519.6
243_1
75 years, male
512.3
4_1
88 years, female
511.0
348_1
84 years, male
508.3
353_1
82 years, female
497.1
352_1
62 years, male
488.8
389_1
86 years, female
482.8
42_1
85 years, male
478.9
2_1
77 years, female
471.9
320_1
89 years, female
471.2
35_1
74 years, female
468.1
311_1
78 years, male
460.8
354_1
81 years, female
460.2
291_1
76 years, male
459.0
376_1
75 years, female
456.6
452_1
88 years, female
441.1
172_1
72 years, female
440.3
356_1
87 years, female
437.7
377_1
82 years, female
437.1
318_1
68 years, male
426.8
406_1
79 years, male
422.9
292_1
71 years, male
422.1
99_1
64 years, male
420.2
506_1
65 years, male
417.7
189_1
76 years, male
406.5
480_1
63 years, male
393.8
251_1
78 years, male
392.8
517_1
88 years, male
389.0
264_1
73 years, female
388.0
117_1
61 years, male
379.2
313_1
79 years, female
376.8
115_1
83 years, male
376.7
335_1
73 years, female
370.1
295_1
61 years, female
362.2
503_1
68 years, male
360.7
425_1
59 years, female
357.3
396_1
62 years, male
354.7
394_1
75 years, female
346.1
526_1
61 years, male
340.5
324_1
76 years, male
340.0
119_1
70 years, female
338.6
495_1
57 years, female
337.5
405_1
91 years, male
336.4
17_1
71 years, male
331.6
153_1
70 years, female
328.7
139_1
64 years, female
326.7
18_1
88 years, male
325.3
355_1
70 years, female
323.7
314_1
67 years, male
320.3
137_1
83 years, male
314.4
468_1
89 years, male
314.2
246_1
77 years, male
313.4
286_1
68 years, female
298.4
120_1
70 years, female
293.6
9_1
66 years, female
292.6
254_1
77 years, female
292.4
404_1
82 years, female
285.6
499_1
55 years, female
282.3
126_1
63 years, male
278.2
265_1
87 years, male
265.6
518_1
75 years, female
264.4
308_1
70 years, female
264.0
229_1
69 years, female
221.6
315_1
62 years, female
205.0
288_1
66 years, female
193.0
89_1
63 years, male
192.9
217_1
76 years, male
187.2
81_1
67 years, male
186.4
43_1
64 years, female
185.5
109_1
81 years, female
185.5
266_1
85 years, male
181.3
142_1
61 years, female
172.8
490_1
67 years, female
169.5
162_1
79 years, female
130.8
32_1
67 years, male
129.8
501_1
88 years, male
127.5
415_1
77 years, female
126.5
466_1
57 years, female
122.3
149_1
88 years, male
103.7
491_1
89 years, female
103.5
414_1
84 years, female
99.3
413_1
59 years, female
62.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.