HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:474.4 nTPM
HPA Brain:358.8 nTPM
GTEx:474.4 nTPM
FANTOM5:574.0 Scaled Tags Per Million
Mouse:820.8 nTPM
Allen mouse:17.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019007Antibody CAB004641
Glial cells LowMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 358.8
Sample id Sample description nTPM
Hippocampus
nTPM: 343.9
1898 Male, age 80, left hemisphere 431.7
2529 Female, age 94, left hemisphere 378.6
2148 Female, age 91, left hemisphere 349.9
2621 Female, age 67, right hemisphere 314.8
1911 Female, age 85, right hemisphere 302.8
1855 Male, age 76, left hemisphere 285.8
Dentate gyrus
nTPM: 282.5
2528 Male, age 74, both hemispheres 337.4
1927 Female, age 91, both hemispheres 337.1
2246 Female, age 85, both hemispheres 309.6
2010 Male, age 76, both hemispheres 299.6
2530 Female, age 94, left hemisphere 221.2
2531 Female, age 67, both hemispheres 190.3
Entorhinal gyrus
nTPM: 290.6
1938 Female, age 85, left hemisphere 357.1
2117 Female, age 91, right hemisphere 354.0
2764 Male, age 80, right hemisphere 299.1
1787 Male, age 76, left hemisphere 288.7
2686 Male, age 75, right hemisphere 256.2
2613 Female, age 94, left hemisphere 188.7
Hippocampus, CA1
nTPM: 353.5
2749 Male, age 80, left hemisphere 437.2
2527 Male, age 74, both hemispheres 422.9
1873 Female, age 85, both hemispheres 358.2
2082 Female, age 91, right hemisphere 301.9
2045 Male, age 76, both hemispheres 247.3
Hippocampus, CA2
nTPM: 334.3
2249 Male, age 74, both hemispheres 426.0
1892 Male, age 76, both hemispheres 377.2
1963 Male, age 80, left hemisphere 336.9
2113 Female, age 91, right hemisphere 319.3
1940 Female, age 85, left hemisphere 295.4
2437 Female, age 94, left hemisphere 251.2
Hippocampus, CA3
nTPM: 317.1
2436 Male, age 74, both hemispheres 455.0
1867 Male, age 76, both hemispheres 338.3
1891 Female, age 85, both hemispheres 324.4
2137 Male, age 80, left hemisphere 324.0
2620 Female, age 94, left hemisphere 235.3
2861 Female, age 67, both hemispheres 225.7
Parahippocampal cortex
nTPM: 334.3
1850 Male, age 80, both hemispheres 394.9
2250 Female, age 67, right hemisphere 393.6
1933 Female, age 85, both hemispheres 364.5
2245 Female, age 91, both hemispheres 349.3
1990 Female, age 91, right hemisphere 337.7
2692 Male, age 74, both hemispheres 322.9
2622 Female, age 67, right hemisphere 320.9
2018 Male, age 76, both hemispheres 296.8
2532 Female, age 72, left hemisphere 281.1
2693 Female, age 94, both hemispheres 280.8
Perirhinal gyrus
nTPM: 358.8
1847 Female, age 91, left hemisphere 446.7
1794 Male, age 80, right hemisphere 384.0
1841 Female, age 85, right hemisphere 378.1
2521 Female, age 94, right hemisphere 314.9
2848 Male, age 76, right hemisphere 270.4
Subiculum
nTPM: 312.0
2619 Male, age 74, both hemispheres 356.4
2729 Female, age 91, right hemisphere 336.0
1901 Male, age 80, both hemispheres 330.9
1977 Female, age 85, both hemispheres 326.2
2042 Male, age 76, both hemispheres 269.1
2438 Female, age 94, left hemisphere 253.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 474.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 474.4
Samples: 197

Max nTPM: 1019.5
Min nTPM: 200.1
Std nTPM: 133.8
Median nTPM: 463.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1019.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 874.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 839.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 772.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 764.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 754.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 731.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 726.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 701.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 687.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 678.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 574.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 574.0
FF:10169-103B7 60 years, female 583.6
FF:10153-102I9 76 years, female 564.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 820.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 820.8
Samples: 4

Max nTPM: 872.5
Min nTPM: 742.8
Sample A Male 861.9
Sample B Male 872.5
Sample C Female 805.9
Sample D Female 742.8
Hippocampal formation
nTPM: 683.2
Samples: 4

Max nTPM: 755.7
Min nTPM: 605.0
Sample A Male 755.7
Sample B Male 605.0
Sample C Female 631.5
Sample D Female 740.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
74736213 Antisense, RP_060302_02_E08, Mouse strain C57BL/6J (56 days, male) 17.5

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