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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.5
nTPM
GTEx:
54.5
nTPM
FANTOM5:
26.7
Scaled Tags Per Million
Pig:
57.2
nTPM
Mouse:
15.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
54.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 54.5
Samples: 105
Max nTPM: 95.6
Min nTPM: 25.8
Std nTPM: 12.5
Median nTPM: 0.0
413_1
59 years, female
95.6
490_1
67 years, female
87.8
149_1
88 years, male
84.0
415_1
77 years, female
79.9
32_1
67 years, male
78.7
89_1
63 years, male
77.9
414_1
84 years, female
77.6
466_1
57 years, female
76.3
491_1
89 years, female
75.4
142_1
61 years, female
75.0
81_1
67 years, male
74.5
162_1
79 years, female
73.0
495_1
57 years, female
69.5
139_1
64 years, female
69.3
126_1
63 years, male
69.1
501_1
88 years, male
68.2
315_1
62 years, female
67.3
499_1
55 years, female
65.8
468_1
89 years, male
65.3
119_1
70 years, female
64.6
137_1
83 years, male
64.4
117_1
61 years, male
63.8
265_1
87 years, male
62.3
9_1
66 years, female
62.0
18_1
88 years, male
61.8
43_1
64 years, female
61.8
313_1
79 years, female
61.1
396_1
62 years, male
61.1
2_1
77 years, female
60.8
109_1
81 years, female
60.7
217_1
76 years, male
60.6
316_1
62 years, male
60.6
324_1
76 years, male
58.1
115_1
83 years, male
57.4
307_1
66 years, female
57.3
42_1
85 years, male
57.2
503_1
68 years, male
57.1
314_1
67 years, male
57.0
246_1
77 years, male
56.8
35_1
74 years, female
56.6
120_1
70 years, female
56.3
145_1
84 years, male
55.6
254_1
77 years, female
55.4
526_1
61 years, male
55.4
311_1
78 years, male
55.2
286_1
68 years, female
54.5
425_1
59 years, female
54.4
375_1
74 years, female
54.1
251_1
78 years, male
54.0
406_1
79 years, male
53.8
447_1
81 years, male
53.4
4_1
88 years, female
53.2
189_1
76 years, male
53.2
347_1
72 years, male
52.4
237_1
82 years, male
52.3
153_1
70 years, female
52.1
266_1
85 years, male
51.9
355_1
70 years, female
51.1
405_1
91 years, male
51.1
517_1
88 years, male
50.9
518_1
75 years, female
50.6
404_1
82 years, female
50.3
348_1
84 years, male
50.1
389_1
86 years, female
50.1
17_1
71 years, male
49.9
291_1
76 years, male
49.2
288_1
66 years, female
48.7
292_1
71 years, male
48.2
172_1
72 years, female
48.1
229_1
69 years, female
47.8
308_1
70 years, female
47.3
6_1
73 years, female
46.9
318_1
68 years, male
45.9
394_1
75 years, female
45.9
264_1
73 years, female
45.0
295_1
61 years, female
45.0
335_1
73 years, female
44.5
354_1
81 years, female
44.5
356_1
87 years, female
44.1
352_1
62 years, male
43.8
386_1
76 years, male
43.8
480_1
63 years, male
43.8
319_1
81 years, male
43.4
243_1
75 years, male
43.3
320_1
89 years, female
43.3
350_1
84 years, female
43.1
41_1
94 years, female
42.9
506_1
65 years, male
42.6
376_1
75 years, female
42.5
317_1
60 years, male
42.4
377_1
82 years, female
42.4
99_1
64 years, male
41.6
177_1
74 years, male
41.6
379_1
60 years, male
41.4
293_1
68 years, female
41.3
384_1
83 years, male
41.0
173_1
67 years, male
40.0
321_1
62 years, female
39.7
353_1
82 years, female
39.2
322_1
76 years, male
39.0
349_1
83 years, male
38.7
163_1
78 years, male
37.3
351_1
91 years, male
37.3
452_1
88 years, female
35.3
218_1
71 years, female
25.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
