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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.0
nTPM
Monaco:
73.5
nTPM
Schmiedel:
88.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.0
HPA sample
nTPM
gdT-cell nTPM: 25.1
Samples: 6
Max nTPM: 30.4
Min nTPM: 17.4
P10809_1007
18.4
P10809_1022
29.5
P10809_1041
17.4
P10809_1060
25.4
P10809_1077
30.4
P10809_1098
29.4
MAIT T-cell nTPM: 30.9
Samples: 6
Max nTPM: 38.6
Min nTPM: 25.1
P10809_1006
25.1
P10809_1024
35.1
P10809_1043
26.7
P10809_1062
32.3
P10809_1083
27.5
P10809_1097
38.6
Memory CD4 T-cell nTPM: 28.9
Samples: 6
Max nTPM: 40.4
Min nTPM: 17.2
P10809_1014
22.7
P10809_1026
17.2
P10809_1045
26.4
P10809_1064
31.5
P10809_1086
40.4
P10809_1113
35.2
Memory CD8 T-cell nTPM: 27.8
Samples: 5
Max nTPM: 37.6
Min nTPM: 22.0
P10809_1012
25.9
P10809_1027
22.0
P10809_1046
25.5
P10809_1065
28.2
P10809_1111
37.6
Naive CD4 T-cell nTPM: 24.0
Samples: 6
Max nTPM: 28.0
Min nTPM: 22.1
P10809_1015
23.5
P10809_1030
22.1
P10809_1049
22.9
P10809_1068
24.5
P10809_1085
28.0
P10809_1112
23.2
Naive CD8 T-cell nTPM: 26.3
Samples: 6
Max nTPM: 38.5
Min nTPM: 16.4
P10809_1016
16.4
P10809_1031
20.6
P10809_1050
23.3
P10809_1069
38.5
P10809_1087
33.6
P10809_1110
25.1
T-reg nTPM: 32.0
Samples: 6
Max nTPM: 44.3
Min nTPM: 20.6
P10809_1018
20.6
P10809_1037
28.9
P10809_1056
22.3
P10809_1075
44.3
P10809_1094
31.8
P10809_1106
43.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.8
Samples: 4
Max nTPM: 64.1
Min nTPM: 41.6
RHH5202_R3573
64.1
RHH5230_R3602
56.9
RHH5259_R3631
52.4
RHH5288_R3660
41.6
Effector memory CD8 T-cell nTPM: 73.6
Samples: 4
Max nTPM: 83.2
Min nTPM: 67.7
RHH5203_R3574
83.2
RHH5231_R3603
68.7
RHH5260_R3632
67.7
RHH5289_R3661
74.6
MAIT T-cell nTPM: 64.5
Samples: 4
Max nTPM: 79.2
Min nTPM: 49.2
RHH5233_R3605
79.2
RHH5205_R3576
71.8
RHH5262_R3634
57.8
RHH5297_R3663
49.2
Memory CD4 T-cell TFH nTPM: 55.9
Samples: 4
Max nTPM: 70.6
Min nTPM: 42.4
RHH5300_R3666
49.5
RHH5236_R3608
42.4
RHH5265_R3637
60.9
RHH5208_R3579
70.6
Memory CD4 T-cell Th1 nTPM: 48.9
Samples: 4
Max nTPM: 57.3
Min nTPM: 36.5
RHH5210_R3581
36.5
RHH5302_R3668
53.9
RHH5238_R3610
48.0
RHH5267_R3639
57.3
Memory CD4 T-cell Th1/Th17 nTPM: 53.9
Samples: 4
Max nTPM: 59.5
Min nTPM: 48.1
RHH5303_R3669
56.8
RHH5211_R3582
51.0
RHH5239_R3611
48.1
RHH5268_R3640
59.5
Memory CD4 T-cell Th17 nTPM: 66.8
Samples: 4
Max nTPM: 73.8
Min nTPM: 46.7
RHH5304_R3670
73.1
RHH5212_R3583
46.7
RHH5240_R3612
73.8
RHH5269_R3641
73.7
Memory CD4 T-cell Th2 nTPM: 66.7
Samples: 4
Max nTPM: 76.2
Min nTPM: 47.8
RHH5305_R3671
47.8
RHH5213_R3584
76.2
RHH5241_R3613
75.2
RHH5270_R3642
67.5
Naive CD4 T-cell nTPM: 46.4
Samples: 4
Max nTPM: 56.0
Min nTPM: 39.5
RHH5306_R3672
47.7
RHH5214_R3585
39.5
RHH5242_R3614
42.4
RHH5271_R3643
56.0
Naive CD8 T-cell nTPM: 54.6
Samples: 4
Max nTPM: 78.0
Min nTPM: 40.9
RHH5201_R3572
78.0
RHH5229_R3601
40.9
RHH5258_R3630
53.6
RHH5287_R3659
45.8
Non-Vd2 gdTCR nTPM: 62.8
Samples: 4
Max nTPM: 76.9
Min nTPM: 48.7
RHH5235_R3607
76.9
RHH5264_R3636
69.8
RHH5207_R3578
55.6
RHH5299_R3665
48.7
T-reg nTPM: 59.5
Samples: 4
Max nTPM: 69.0
Min nTPM: 48.3
RHH5301_R3667
48.3
RHH5237_R3609
69.0
RHH5266_R3638
62.4
RHH5209_R3580
58.4
Terminal effector memory CD4 T-cell nTPM: 72.7
Samples: 2
Max nTPM: 76.1
Min nTPM: 69.3
RHH5243_R3615
76.1
RHH5272_R3644
69.3
Terminal effector memory CD8 T-cell nTPM: 65.3
Samples: 4
Max nTPM: 76.8
Min nTPM: 55.8
RHH5232_R3604
76.8
RHH5204_R3575
55.8
RHH5261_R3633
68.7
RHH5296_R3662
60.0
Vd2 gdTCR nTPM: 60.2
Samples: 4
Max nTPM: 74.0
Min nTPM: 46.4
RHH5234_R3606
69.7
RHH5206_R3577
50.8
RHH5263_R3635
74.0
RHH5298_R3664
46.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
