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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
118.3
nTPM
Monaco:
89.3
nTPM
Schmiedel:
41.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.3
HPA sample
nTPM
gdT-cell nTPM: 64.8
Samples: 6
Max nTPM: 76.0
Min nTPM: 53.1
P10809_1007
60.5
P10809_1022
60.2
P10809_1041
74.6
P10809_1060
53.1
P10809_1077
76.0
P10809_1098
64.6
MAIT T-cell nTPM: 83.4
Samples: 6
Max nTPM: 104.3
Min nTPM: 62.8
P10809_1006
66.2
P10809_1024
88.1
P10809_1043
62.8
P10809_1062
83.2
P10809_1083
95.8
P10809_1097
104.3
Memory CD4 T-cell nTPM: 85.6
Samples: 6
Max nTPM: 91.6
Min nTPM: 74.3
P10809_1014
88.1
P10809_1026
90.2
P10809_1045
74.3
P10809_1064
91.6
P10809_1086
83.8
P10809_1113
85.4
Memory CD8 T-cell nTPM: 74.6
Samples: 5
Max nTPM: 89.5
Min nTPM: 58.6
P10809_1012
58.6
P10809_1027
89.5
P10809_1046
65.6
P10809_1065
78.4
P10809_1111
80.9
Naive CD4 T-cell nTPM: 78.2
Samples: 6
Max nTPM: 98.7
Min nTPM: 69.1
P10809_1015
98.7
P10809_1030
74.5
P10809_1049
69.7
P10809_1068
77.2
P10809_1085
80.1
P10809_1112
69.1
Naive CD8 T-cell nTPM: 78.6
Samples: 6
Max nTPM: 84.1
Min nTPM: 66.5
P10809_1016
77.6
P10809_1031
80.3
P10809_1050
66.5
P10809_1069
81.8
P10809_1087
84.1
P10809_1110
81.1
T-reg nTPM: 118.4
Samples: 6
Max nTPM: 142.3
Min nTPM: 93.5
P10809_1018
93.5
P10809_1037
96.5
P10809_1056
138.4
P10809_1075
140.8
P10809_1094
98.6
P10809_1106
142.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.6
Samples: 4
Max nTPM: 94.7
Min nTPM: 53.8
RHH5202_R3573
94.7
RHH5230_R3602
62.7
RHH5259_R3631
53.8
RHH5288_R3660
87.3
Effector memory CD8 T-cell nTPM: 64.8
Samples: 4
Max nTPM: 87.0
Min nTPM: 48.9
RHH5203_R3574
73.2
RHH5231_R3603
87.0
RHH5260_R3632
50.0
RHH5289_R3661
48.9
MAIT T-cell nTPM: 86.8
Samples: 4
Max nTPM: 94.7
Min nTPM: 78.2
RHH5233_R3605
78.2
RHH5205_R3576
86.0
RHH5262_R3634
88.2
RHH5297_R3663
94.7
Memory CD4 T-cell TFH nTPM: 89.3
Samples: 4
Max nTPM: 124.2
Min nTPM: 69.8
RHH5300_R3666
81.8
RHH5236_R3608
124.2
RHH5265_R3637
69.8
RHH5208_R3579
81.5
Memory CD4 T-cell Th1 nTPM: 77.8
Samples: 4
Max nTPM: 114.5
Min nTPM: 52.1
RHH5210_R3581
74.8
RHH5302_R3668
114.5
RHH5238_R3610
69.8
RHH5267_R3639
52.1
Memory CD4 T-cell Th1/Th17 nTPM: 85.7
Samples: 4
Max nTPM: 112.3
Min nTPM: 66.1
RHH5303_R3669
97.8
RHH5211_R3582
112.3
RHH5239_R3611
66.7
RHH5268_R3640
66.1
Memory CD4 T-cell Th17 nTPM: 72.3
Samples: 4
Max nTPM: 88.0
Min nTPM: 57.2
RHH5304_R3670
71.9
RHH5212_R3583
88.0
RHH5240_R3612
72.2
RHH5269_R3641
57.2
Memory CD4 T-cell Th2 nTPM: 83.7
Samples: 4
Max nTPM: 95.6
Min nTPM: 51.7
RHH5305_R3671
93.4
RHH5213_R3584
95.6
RHH5241_R3613
94.1
RHH5270_R3642
51.7
Naive CD4 T-cell nTPM: 71.0
Samples: 4
Max nTPM: 97.7
Min nTPM: 47.8
RHH5306_R3672
89.6
RHH5214_R3585
97.7
RHH5242_R3614
47.8
RHH5271_R3643
48.9
Naive CD8 T-cell nTPM: 67.1
Samples: 4
Max nTPM: 73.5
Min nTPM: 62.0
RHH5201_R3572
63.0
RHH5229_R3601
73.5
RHH5258_R3630
69.9
RHH5287_R3659
62.0
Non-Vd2 gdTCR nTPM: 77.3
Samples: 4
Max nTPM: 95.4
Min nTPM: 48.6
RHH5235_R3607
48.6
RHH5264_R3636
90.6
RHH5207_R3578
74.6
RHH5299_R3665
95.4
T-reg nTPM: 71.4
Samples: 4
Max nTPM: 81.8
Min nTPM: 50.2
RHH5301_R3667
81.8
RHH5237_R3609
81.6
RHH5266_R3638
50.2
RHH5209_R3580
72.1
Terminal effector memory CD4 T-cell nTPM: 66.1
Samples: 2
Max nTPM: 72.2
Min nTPM: 59.9
RHH5243_R3615
72.2
RHH5272_R3644
59.9
Terminal effector memory CD8 T-cell nTPM: 83.7
Samples: 4
Max nTPM: 128.0
Min nTPM: 55.0
RHH5232_R3604
70.0
RHH5204_R3575
128.0
RHH5261_R3633
55.0
RHH5296_R3662
81.7
Vd2 gdTCR nTPM: 85.4
Samples: 4
Max nTPM: 119.0
Min nTPM: 56.1
RHH5234_R3606
78.6
RHH5206_R3577
119.0
RHH5263_R3635
56.1
RHH5298_R3664
87.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
