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RSPH4A
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  • RSPH4A
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RSPH4A
Synonyms CILD11, dJ412I7.1, FLJ37974, RSHL3, RSPH6B
Gene descriptioni

Full gene name according to HGNC.

Radial spoke head component 4A
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband q22.1
Chromosome location (bp) 116616479 - 116632985
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000111834 (version 109)
Entrez gene 345895
HGNC HGNC:21558
UniProt Q5TD94 (UniProt - Evidence at protein level)
neXtProt NX_Q5TD94
GeneCards RSPH4A
Antibodypedia RSPH4A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the axonemal radial spoke head which plays an important role in ciliary motility 1. Essential for triplet radial spokes (RS1, RS2 and RS3) head assembly in the motile cilia (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cilium biogenesis/degradation
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein that appears to be a component the radial spoke head, as determined by homology to similar proteins in the biflagellate alga Chlamydomonas reinhardtii and other ciliates. Radial spokes, which are regularly spaced along cilia, sperm, and flagella axonemes, consist of a thin 'stalk' and a bulbous 'head' that form a signal transduction scaffold between the central pair of microtubules and dynein. Mutations in this gene cause primary ciliary dyskinesia 1, a disease arising from dysmotility of motile cilia and sperm. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RSPH4A-201
ENSP00000229554
ENST00000229554
Q5TD94
[Direct mapping] Radial spoke head protein 4 homolog A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Respiratory diseases
   Tracheobronchial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001534 [radial spoke]
GO:0001535 [radial spoke head]
GO:0003341 [cilium movement]
GO:0003674 [molecular_function]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0030030 [cell projection organization]
GO:0031514 [motile cilium]
GO:0035082 [axoneme assembly]
GO:0042995 [cell projection]
GO:0060271 [cilium assembly]
GO:0060294 [cilium movement involved in cell motility]
GO:0062177 [radial spoke assembly]
GO:0120221 [maintenance of ciliary planar beating movement pattern]
Show all
716 aa
80.7 kDa
No 0
RSPH4A-202
ENSP00000357569
ENST00000368580
Q5TD94
[Direct mapping] Radial spoke head protein 4 homolog A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Respiratory diseases
   Tracheobronchial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001534 [radial spoke]
GO:0003341 [cilium movement]
GO:0003674 [molecular_function]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0030030 [cell projection organization]
GO:0031514 [motile cilium]
GO:0035082 [axoneme assembly]
GO:0042995 [cell projection]
GO:0060271 [cilium assembly]
GO:0060294 [cilium movement involved in cell motility]
GO:0062177 [radial spoke assembly]
Show all
469 aa
52.6 kDa
No 0
RSPH4A-203
ENSP00000357570
ENST00000368581
Q5TD94
[Direct mapping] Radial spoke head protein 4 homolog A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Respiratory diseases
   Tracheobronchial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001534 [radial spoke]
GO:0003341 [cilium movement]
GO:0003674 [molecular_function]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0030030 [cell projection organization]
GO:0031514 [motile cilium]
GO:0035082 [axoneme assembly]
GO:0042995 [cell projection]
GO:0060271 [cilium assembly]
GO:0060294 [cilium movement involved in cell motility]
GO:0062177 [radial spoke assembly]
Show all
600 aa
67.4 kDa
No 0

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