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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.3
nTPM
Monaco:
28.5
nTPM
Schmiedel:
75.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.3
HPA sample
nTPM
gdT-cell nTPM: 10.9
Samples: 6
Max nTPM: 16.2
Min nTPM: 6.7
P10809_1007
6.7
P10809_1022
10.4
P10809_1041
11.0
P10809_1060
16.2
P10809_1077
8.8
P10809_1098
12.4
MAIT T-cell nTPM: 32.1
Samples: 6
Max nTPM: 38.3
Min nTPM: 24.9
P10809_1006
24.9
P10809_1024
37.6
P10809_1043
24.9
P10809_1062
36.5
P10809_1083
38.3
P10809_1097
30.6
Memory CD4 T-cell nTPM: 27.1
Samples: 6
Max nTPM: 34.9
Min nTPM: 20.4
P10809_1014
21.5
P10809_1026
28.7
P10809_1045
20.4
P10809_1064
27.1
P10809_1086
34.9
P10809_1113
30.2
Memory CD8 T-cell nTPM: 16.3
Samples: 5
Max nTPM: 17.6
Min nTPM: 14.9
P10809_1012
16.3
P10809_1027
16.6
P10809_1046
14.9
P10809_1065
17.6
P10809_1111
16.2
Naive CD4 T-cell nTPM: 26.3
Samples: 6
Max nTPM: 35.0
Min nTPM: 20.8
P10809_1015
20.8
P10809_1030
35.0
P10809_1049
21.0
P10809_1068
26.3
P10809_1085
28.5
P10809_1112
26.3
Naive CD8 T-cell nTPM: 22.3
Samples: 6
Max nTPM: 30.6
Min nTPM: 8.6
P10809_1016
29.2
P10809_1031
26.2
P10809_1050
16.7
P10809_1069
22.3
P10809_1087
8.6
P10809_1110
30.6
T-reg nTPM: 32.3
Samples: 6
Max nTPM: 50.7
Min nTPM: 18.1
P10809_1018
23.0
P10809_1037
50.7
P10809_1056
18.1
P10809_1075
26.9
P10809_1094
46.4
P10809_1106
28.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 20.9
Samples: 4
Max nTPM: 34.6
Min nTPM: 10.0
RHH5202_R3573
15.5
RHH5230_R3602
23.6
RHH5259_R3631
10.0
RHH5288_R3660
34.6
Effector memory CD8 T-cell nTPM: 8.0
Samples: 4
Max nTPM: 9.2
Min nTPM: 6.3
RHH5203_R3574
9.2
RHH5231_R3603
8.1
RHH5260_R3632
8.5
RHH5289_R3661
6.3
MAIT T-cell nTPM: 25.7
Samples: 4
Max nTPM: 37.9
Min nTPM: 14.6
RHH5233_R3605
33.8
RHH5205_R3576
16.5
RHH5262_R3634
14.6
RHH5297_R3663
37.9
Memory CD4 T-cell TFH nTPM: 28.6
Samples: 4
Max nTPM: 40.5
Min nTPM: 20.9
RHH5300_R3666
20.9
RHH5236_R3608
40.5
RHH5265_R3637
23.5
RHH5208_R3579
29.3
Memory CD4 T-cell Th1 nTPM: 27.0
Samples: 4
Max nTPM: 42.8
Min nTPM: 16.9
RHH5210_R3581
16.9
RHH5302_R3668
42.8
RHH5238_R3610
29.4
RHH5267_R3639
18.8
Memory CD4 T-cell Th1/Th17 nTPM: 28.3
Samples: 4
Max nTPM: 36.9
Min nTPM: 17.0
RHH5303_R3669
36.9
RHH5211_R3582
34.0
RHH5239_R3611
25.3
RHH5268_R3640
17.0
Memory CD4 T-cell Th17 nTPM: 24.4
Samples: 4
Max nTPM: 36.9
Min nTPM: 11.7
RHH5304_R3670
22.6
RHH5212_R3583
36.9
RHH5240_R3612
26.2
RHH5269_R3641
11.7
Memory CD4 T-cell Th2 nTPM: 27.3
Samples: 4
Max nTPM: 52.3
Min nTPM: 12.7
RHH5305_R3671
20.5
RHH5213_R3584
23.7
RHH5241_R3613
52.3
RHH5270_R3642
12.7
Naive CD4 T-cell nTPM: 21.0
Samples: 4
Max nTPM: 31.2
Min nTPM: 12.3
RHH5306_R3672
17.9
RHH5214_R3585
31.2
RHH5242_R3614
22.6
RHH5271_R3643
12.3
Naive CD8 T-cell nTPM: 24.3
Samples: 4
Max nTPM: 28.9
Min nTPM: 21.1
RHH5201_R3572
21.8
RHH5229_R3601
25.3
RHH5258_R3630
28.9
RHH5287_R3659
21.1
Non-Vd2 gdTCR nTPM: 6.9
Samples: 4
Max nTPM: 10.1
Min nTPM: 5.6
RHH5235_R3607
10.1
RHH5264_R3636
6.1
RHH5207_R3578
5.6
RHH5299_R3665
5.6
T-reg nTPM: 26.7
Samples: 4
Max nTPM: 41.9
Min nTPM: 17.4
RHH5301_R3667
27.7
RHH5237_R3609
41.9
RHH5266_R3638
17.4
RHH5209_R3580
19.6
Terminal effector memory CD4 T-cell nTPM: 16.0
Samples: 2
Max nTPM: 17.5
Min nTPM: 14.5
RHH5243_R3615
17.5
RHH5272_R3644
14.5
Terminal effector memory CD8 T-cell nTPM: 6.3
Samples: 4
Max nTPM: 10.0
Min nTPM: 3.8
RHH5232_R3604
10.0
RHH5204_R3575
4.5
RHH5261_R3633
7.0
RHH5296_R3662
3.8
Vd2 gdTCR nTPM: 20.6
Samples: 4
Max nTPM: 28.3
Min nTPM: 13.5
RHH5234_R3606
28.3
RHH5206_R3577
19.6
RHH5263_R3635
13.5
RHH5298_R3664
21.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
