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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
54.3
nTPM
Monaco:
317.1
nTPM
Schmiedel:
473.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.3
HPA sample
nTPM
gdT-cell nTPM: 44.8
Samples: 6
Max nTPM: 50.9
Min nTPM: 38.5
P10809_1007
38.5
P10809_1022
48.4
P10809_1041
50.9
P10809_1060
39.2
P10809_1077
44.9
P10809_1098
46.8
MAIT T-cell nTPM: 48.2
Samples: 6
Max nTPM: 68.2
Min nTPM: 39.6
P10809_1006
45.9
P10809_1024
68.2
P10809_1043
40.6
P10809_1062
47.4
P10809_1083
47.2
P10809_1097
39.6
Memory CD4 T-cell nTPM: 46.0
Samples: 6
Max nTPM: 53.6
Min nTPM: 33.7
P10809_1014
50.7
P10809_1026
33.7
P10809_1045
44.5
P10809_1064
47.4
P10809_1086
53.6
P10809_1113
46.0
Memory CD8 T-cell nTPM: 43.3
Samples: 5
Max nTPM: 55.2
Min nTPM: 29.6
P10809_1012
47.5
P10809_1027
40.7
P10809_1046
29.6
P10809_1065
55.2
P10809_1111
43.4
Naive CD4 T-cell nTPM: 53.3
Samples: 6
Max nTPM: 63.1
Min nTPM: 45.9
P10809_1015
55.8
P10809_1030
51.2
P10809_1049
45.9
P10809_1068
63.1
P10809_1085
56.3
P10809_1112
47.3
Naive CD8 T-cell nTPM: 47.0
Samples: 6
Max nTPM: 55.0
Min nTPM: 35.4
P10809_1016
47.8
P10809_1031
46.1
P10809_1050
43.4
P10809_1069
55.0
P10809_1087
54.3
P10809_1110
35.4
T-reg nTPM: 54.3
Samples: 6
Max nTPM: 70.2
Min nTPM: 34.2
P10809_1018
56.8
P10809_1037
70.2
P10809_1056
43.6
P10809_1075
34.2
P10809_1094
57.0
P10809_1106
64.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
317.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 250.3
Samples: 4
Max nTPM: 272.8
Min nTPM: 231.5
RHH5202_R3573
272.8
RHH5230_R3602
234.7
RHH5259_R3631
231.5
RHH5288_R3660
262.2
Effector memory CD8 T-cell nTPM: 286.1
Samples: 4
Max nTPM: 322.5
Min nTPM: 265.9
RHH5203_R3574
274.7
RHH5231_R3603
281.2
RHH5260_R3632
265.9
RHH5289_R3661
322.5
MAIT T-cell nTPM: 265.9
Samples: 4
Max nTPM: 341.1
Min nTPM: 196.9
RHH5233_R3605
291.3
RHH5205_R3576
341.1
RHH5262_R3634
196.9
RHH5297_R3663
234.2
Memory CD4 T-cell TFH nTPM: 268.3
Samples: 4
Max nTPM: 344.5
Min nTPM: 221.5
RHH5300_R3666
221.5
RHH5236_R3608
272.3
RHH5265_R3637
234.8
RHH5208_R3579
344.5
Memory CD4 T-cell Th1 nTPM: 247.6
Samples: 4
Max nTPM: 266.0
Min nTPM: 207.6
RHH5210_R3581
266.0
RHH5302_R3668
257.5
RHH5238_R3610
207.6
RHH5267_R3639
259.2
Memory CD4 T-cell Th1/Th17 nTPM: 267.8
Samples: 4
Max nTPM: 289.0
Min nTPM: 219.0
RHH5303_R3669
287.1
RHH5211_R3582
275.9
RHH5239_R3611
289.0
RHH5268_R3640
219.0
Memory CD4 T-cell Th17 nTPM: 277.3
Samples: 4
Max nTPM: 307.5
Min nTPM: 254.7
RHH5304_R3670
254.7
RHH5212_R3583
275.5
RHH5240_R3612
307.5
RHH5269_R3641
271.6
Memory CD4 T-cell Th2 nTPM: 263.6
Samples: 4
Max nTPM: 306.0
Min nTPM: 231.7
RHH5305_R3671
261.8
RHH5213_R3584
306.0
RHH5241_R3613
254.9
RHH5270_R3642
231.7
Naive CD4 T-cell nTPM: 263.0
Samples: 4
Max nTPM: 307.5
Min nTPM: 234.5
RHH5306_R3672
259.9
RHH5214_R3585
250.2
RHH5242_R3614
234.5
RHH5271_R3643
307.5
Naive CD8 T-cell nTPM: 233.4
Samples: 4
Max nTPM: 291.1
Min nTPM: 193.4
RHH5201_R3572
291.1
RHH5229_R3601
193.4
RHH5258_R3630
200.0
RHH5287_R3659
248.9
Non-Vd2 gdTCR nTPM: 286.8
Samples: 4
Max nTPM: 364.5
Min nTPM: 251.4
RHH5235_R3607
251.4
RHH5264_R3636
271.4
RHH5207_R3578
364.5
RHH5299_R3665
259.8
T-reg nTPM: 256.9
Samples: 4
Max nTPM: 298.5
Min nTPM: 232.1
RHH5301_R3667
245.1
RHH5237_R3609
251.8
RHH5266_R3638
232.1
RHH5209_R3580
298.5
Terminal effector memory CD4 T-cell nTPM: 278.3
Samples: 2
Max nTPM: 281.8
Min nTPM: 274.7
RHH5243_R3615
274.7
RHH5272_R3644
281.8
Terminal effector memory CD8 T-cell nTPM: 317.1
Samples: 4
Max nTPM: 373.7
Min nTPM: 284.6
RHH5232_R3604
322.5
RHH5204_R3575
287.7
RHH5261_R3633
373.7
RHH5296_R3662
284.6
Vd2 gdTCR nTPM: 256.7
Samples: 4
Max nTPM: 270.7
Min nTPM: 239.5
RHH5234_R3606
270.7
RHH5206_R3577
268.6
RHH5263_R3635
248.1
RHH5298_R3664
239.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
