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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.4
nTPM
Monaco:
81.0
nTPM
Schmiedel:
37.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.4
HPA sample
nTPM
gdT-cell nTPM: 53.4
Samples: 6
Max nTPM: 73.9
Min nTPM: 30.8
P10809_1007
30.8
P10809_1022
47.3
P10809_1041
73.9
P10809_1060
64.5
P10809_1077
60.0
P10809_1098
44.0
MAIT T-cell nTPM: 43.9
Samples: 6
Max nTPM: 53.8
Min nTPM: 27.9
P10809_1006
27.9
P10809_1024
52.0
P10809_1043
48.5
P10809_1062
45.9
P10809_1083
35.1
P10809_1097
53.8
Memory CD4 T-cell nTPM: 58.0
Samples: 6
Max nTPM: 73.7
Min nTPM: 46.2
P10809_1014
46.2
P10809_1026
73.7
P10809_1045
48.8
P10809_1064
62.3
P10809_1086
55.4
P10809_1113
61.3
Memory CD8 T-cell nTPM: 72.7
Samples: 5
Max nTPM: 114.9
Min nTPM: 46.8
P10809_1012
46.8
P10809_1027
114.9
P10809_1046
61.8
P10809_1065
67.0
P10809_1111
73.0
Naive CD4 T-cell nTPM: 71.6
Samples: 6
Max nTPM: 94.8
Min nTPM: 54.3
P10809_1015
54.3
P10809_1030
84.2
P10809_1049
94.8
P10809_1068
73.1
P10809_1085
59.4
P10809_1112
63.5
Naive CD8 T-cell nTPM: 78.4
Samples: 6
Max nTPM: 95.9
Min nTPM: 68.8
P10809_1016
70.6
P10809_1031
95.9
P10809_1050
94.4
P10809_1069
71.0
P10809_1087
69.7
P10809_1110
68.8
T-reg nTPM: 55.9
Samples: 6
Max nTPM: 69.4
Min nTPM: 41.1
P10809_1018
41.1
P10809_1037
49.3
P10809_1056
62.7
P10809_1075
52.4
P10809_1094
69.4
P10809_1106
60.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 42.5
Samples: 4
Max nTPM: 81.7
Min nTPM: 25.3
RHH5202_R3573
33.0
RHH5230_R3602
25.3
RHH5259_R3631
30.0
RHH5288_R3660
81.7
Effector memory CD8 T-cell nTPM: 42.7
Samples: 4
Max nTPM: 57.4
Min nTPM: 27.6
RHH5203_R3574
45.0
RHH5231_R3603
57.4
RHH5260_R3632
27.6
RHH5289_R3661
40.6
MAIT T-cell nTPM: 29.5
Samples: 4
Max nTPM: 39.4
Min nTPM: 14.4
RHH5233_R3605
29.9
RHH5205_R3576
14.4
RHH5262_R3634
34.4
RHH5297_R3663
39.4
Memory CD4 T-cell TFH nTPM: 51.4
Samples: 4
Max nTPM: 70.7
Min nTPM: 34.1
RHH5300_R3666
57.4
RHH5236_R3608
70.7
RHH5265_R3637
43.5
RHH5208_R3579
34.1
Memory CD4 T-cell Th1 nTPM: 52.4
Samples: 4
Max nTPM: 85.8
Min nTPM: 38.6
RHH5210_R3581
38.6
RHH5302_R3668
85.8
RHH5238_R3610
45.5
RHH5267_R3639
39.6
Memory CD4 T-cell Th1/Th17 nTPM: 33.9
Samples: 4
Max nTPM: 58.5
Min nTPM: 23.0
RHH5303_R3669
58.5
RHH5211_R3582
26.9
RHH5239_R3611
27.0
RHH5268_R3640
23.0
Memory CD4 T-cell Th17 nTPM: 27.1
Samples: 4
Max nTPM: 36.5
Min nTPM: 20.2
RHH5304_R3670
29.3
RHH5212_R3583
36.5
RHH5240_R3612
20.2
RHH5269_R3641
22.4
Memory CD4 T-cell Th2 nTPM: 37.1
Samples: 4
Max nTPM: 46.4
Min nTPM: 27.8
RHH5305_R3671
42.3
RHH5213_R3584
31.9
RHH5241_R3613
46.4
RHH5270_R3642
27.8
Naive CD4 T-cell nTPM: 52.1
Samples: 4
Max nTPM: 61.0
Min nTPM: 47.2
RHH5306_R3672
51.6
RHH5214_R3585
61.0
RHH5242_R3614
48.5
RHH5271_R3643
47.2
Naive CD8 T-cell nTPM: 48.2
Samples: 4
Max nTPM: 56.5
Min nTPM: 37.4
RHH5201_R3572
49.0
RHH5229_R3601
37.4
RHH5258_R3630
56.5
RHH5287_R3659
49.9
Non-Vd2 gdTCR nTPM: 73.8
Samples: 4
Max nTPM: 118.5
Min nTPM: 38.6
RHH5235_R3607
38.6
RHH5264_R3636
73.0
RHH5207_R3578
65.2
RHH5299_R3665
118.5
T-reg nTPM: 49.9
Samples: 4
Max nTPM: 68.2
Min nTPM: 34.0
RHH5301_R3667
68.2
RHH5237_R3609
61.7
RHH5266_R3638
35.8
RHH5209_R3580
34.0
Terminal effector memory CD4 T-cell nTPM: 47.1
Samples: 2
Max nTPM: 59.7
Min nTPM: 34.4
RHH5243_R3615
34.4
RHH5272_R3644
59.7
Terminal effector memory CD8 T-cell nTPM: 81.0
Samples: 4
Max nTPM: 136.4
Min nTPM: 44.7
RHH5232_R3604
66.0
RHH5204_R3575
136.4
RHH5261_R3633
44.7
RHH5296_R3662
76.9
Vd2 gdTCR nTPM: 39.7
Samples: 4
Max nTPM: 53.1
Min nTPM: 27.9
RHH5234_R3606
33.4
RHH5206_R3577
44.2
RHH5263_R3635
27.9
RHH5298_R3664
53.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
