HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:36.1 nTPM
HPA Brain:31.7 nTPM
GTEx:36.1 nTPM
FANTOM5:72.1 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:24.9 nTPM
Allen mouse:17.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027914
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.9
1898 Male, age 80, left hemisphere 36.7
2529 Female, age 94, left hemisphere 30.5
1855 Male, age 76, left hemisphere 29.8
1911 Female, age 85, right hemisphere 27.6
2621 Female, age 67, right hemisphere 24.8
2148 Female, age 91, left hemisphere 24.2
Dentate gyrus
nTPM: 30.0
2530 Female, age 94, left hemisphere 39.6
2010 Male, age 76, both hemispheres 35.8
1927 Female, age 91, both hemispheres 28.5
2246 Female, age 85, both hemispheres 27.2
2528 Male, age 74, both hemispheres 24.7
2531 Female, age 67, both hemispheres 24.2
Entorhinal gyrus
nTPM: 31.6
1938 Female, age 85, left hemisphere 35.7
2117 Female, age 91, right hemisphere 33.9
2764 Male, age 80, right hemisphere 32.1
2686 Male, age 75, right hemisphere 31.7
1787 Male, age 76, left hemisphere 28.9
2613 Female, age 94, left hemisphere 27.1
Hippocampus, CA1
nTPM: 31.7
2749 Male, age 80, left hemisphere 42.2
1873 Female, age 85, both hemispheres 35.9
2045 Male, age 76, both hemispheres 28.5
2527 Male, age 74, both hemispheres 27.2
2082 Female, age 91, right hemisphere 24.6
Hippocampus, CA2
nTPM: 30.3
1963 Male, age 80, left hemisphere 38.6
1892 Male, age 76, both hemispheres 37.0
2437 Female, age 94, left hemisphere 29.3
1940 Female, age 85, left hemisphere 26.5
2113 Female, age 91, right hemisphere 25.2
2249 Male, age 74, both hemispheres 25.0
Hippocampus, CA3
nTPM: 28.9
1867 Male, age 76, both hemispheres 32.7
1891 Female, age 85, both hemispheres 32.5
2137 Male, age 80, left hemisphere 32.5
2861 Female, age 67, both hemispheres 29.7
2620 Female, age 94, left hemisphere 23.0
2436 Male, age 74, both hemispheres 22.9
Parahippocampal cortex
nTPM: 29.4
1850 Male, age 80, both hemispheres 36.4
1933 Female, age 85, both hemispheres 34.1
1990 Female, age 91, right hemisphere 31.1
2692 Male, age 74, both hemispheres 29.8
2018 Male, age 76, both hemispheres 29.1
2532 Female, age 72, left hemisphere 28.9
2693 Female, age 94, both hemispheres 27.4
2245 Female, age 91, both hemispheres 26.7
2250 Female, age 67, right hemisphere 26.7
2622 Female, age 67, right hemisphere 24.2
Perirhinal gyrus
nTPM: 29.8
1841 Female, age 85, right hemisphere 32.5
1794 Male, age 80, right hemisphere 31.0
2848 Male, age 76, right hemisphere 30.4
1847 Female, age 91, left hemisphere 29.2
2521 Female, age 94, right hemisphere 25.8
Subiculum
nTPM: 29.8
2042 Male, age 76, both hemispheres 34.2
1901 Male, age 80, both hemispheres 33.8
1977 Female, age 85, both hemispheres 32.9
2438 Female, age 94, left hemisphere 31.0
2729 Female, age 91, right hemisphere 24.2
2619 Male, age 74, both hemispheres 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.1
Samples: 197

Max nTPM: 81.0
Min nTPM: 13.0
Std nTPM: 8.7
Median nTPM: 35.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 81.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 66.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 65.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 64.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 64.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 63.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 60.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 55.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 55.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 54.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 52.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.1
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.5
Pig sample Sample description nTPM
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 30.7
Min nTPM: 26.8
Sample A Female 30.7
Sample B Female 28.4
Sample C Male 27.5
Sample D Male 26.8
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 37.7
Min nTPM: 27.9
Sample A Female 37.7
Sample B Female 33.9
Sample C Male 30.3
Sample D Male 27.9
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 30.5
Min nTPM: 28.6
Sample A Female 29.9
Sample B Female 30.5
Sample C Male 30.1
Sample D Male 28.6
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 31.8
Min nTPM: 25.7
Sample A Female 31.8
Sample B Female 27.8
Sample C Male 25.7
Sample D Male 31.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 27.1
Min nTPM: 23.6
Sample A Male 25.1
Sample B Male 27.1
Sample C Female 23.6
Sample D Female 23.9
Hippocampal formation
nTPM: 20.2
Samples: 4

Max nTPM: 26.2
Min nTPM: 16.0
Sample A Male 26.2
Sample B Male 19.8
Sample C Female 16.0
Sample D Female 18.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.6
199218 Antisense, RP_040604_02_E10, Mouse strain C57BL/6J (56 days, male) 17.6

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