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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
172.2
nTPM
Monaco:
848.9
nTPM
Schmiedel:
682.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
172.2
HPA sample
nTPM
gdT-cell nTPM: 128.9
Samples: 6
Max nTPM: 149.7
Min nTPM: 104.5
P10809_1007
149.7
P10809_1022
149.6
P10809_1041
134.1
P10809_1060
110.6
P10809_1077
104.5
P10809_1098
125.1
MAIT T-cell nTPM: 135.1
Samples: 6
Max nTPM: 191.7
Min nTPM: 104.7
P10809_1006
191.7
P10809_1024
132.1
P10809_1043
136.7
P10809_1062
133.5
P10809_1083
111.9
P10809_1097
104.7
Memory CD4 T-cell nTPM: 132.3
Samples: 6
Max nTPM: 153.7
Min nTPM: 106.5
P10809_1014
148.3
P10809_1026
150.9
P10809_1045
153.7
P10809_1064
108.3
P10809_1086
106.5
P10809_1113
126.0
Memory CD8 T-cell nTPM: 136.6
Samples: 5
Max nTPM: 184.6
Min nTPM: 102.6
P10809_1012
184.6
P10809_1027
132.5
P10809_1046
147.9
P10809_1065
115.6
P10809_1111
102.6
Naive CD4 T-cell nTPM: 172.2
Samples: 6
Max nTPM: 194.2
Min nTPM: 144.8
P10809_1015
194.2
P10809_1030
162.5
P10809_1049
179.2
P10809_1068
183.7
P10809_1085
144.8
P10809_1112
168.7
Naive CD8 T-cell nTPM: 137.4
Samples: 6
Max nTPM: 169.4
Min nTPM: 98.9
P10809_1016
169.4
P10809_1031
162.1
P10809_1050
147.7
P10809_1069
98.9
P10809_1087
104.0
P10809_1110
142.0
T-reg nTPM: 125.3
Samples: 6
Max nTPM: 160.1
Min nTPM: 106.8
P10809_1018
160.1
P10809_1037
134.3
P10809_1056
107.2
P10809_1075
123.6
P10809_1094
106.8
P10809_1106
119.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
848.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 660.7
Samples: 4
Max nTPM: 703.8
Min nTPM: 592.4
RHH5202_R3573
703.8
RHH5230_R3602
592.4
RHH5259_R3631
660.4
RHH5288_R3660
686.0
Effector memory CD8 T-cell nTPM: 581.3
Samples: 4
Max nTPM: 685.9
Min nTPM: 442.7
RHH5203_R3574
576.3
RHH5231_R3603
442.7
RHH5260_R3632
620.2
RHH5289_R3661
685.9
MAIT T-cell nTPM: 529.3
Samples: 4
Max nTPM: 644.2
Min nTPM: 457.7
RHH5233_R3605
511.9
RHH5205_R3576
644.2
RHH5262_R3634
457.7
RHH5297_R3663
503.2
Memory CD4 T-cell TFH nTPM: 719.5
Samples: 4
Max nTPM: 823.7
Min nTPM: 626.1
RHH5300_R3666
661.0
RHH5236_R3608
626.1
RHH5265_R3637
767.2
RHH5208_R3579
823.7
Memory CD4 T-cell Th1 nTPM: 711.6
Samples: 4
Max nTPM: 790.7
Min nTPM: 674.8
RHH5210_R3581
790.7
RHH5302_R3668
674.8
RHH5238_R3610
700.5
RHH5267_R3639
680.3
Memory CD4 T-cell Th1/Th17 nTPM: 645.1
Samples: 4
Max nTPM: 733.5
Min nTPM: 520.4
RHH5303_R3669
655.3
RHH5211_R3582
671.0
RHH5239_R3611
733.5
RHH5268_R3640
520.4
Memory CD4 T-cell Th17 nTPM: 664.2
Samples: 4
Max nTPM: 718.3
Min nTPM: 614.0
RHH5304_R3670
718.3
RHH5212_R3583
624.1
RHH5240_R3612
700.3
RHH5269_R3641
614.0
Memory CD4 T-cell Th2 nTPM: 730.1
Samples: 4
Max nTPM: 823.3
Min nTPM: 641.9
RHH5305_R3671
823.3
RHH5213_R3584
772.2
RHH5241_R3613
641.9
RHH5270_R3642
683.1
Naive CD4 T-cell nTPM: 848.9
Samples: 4
Max nTPM: 858.8
Min nTPM: 835.2
RHH5306_R3672
858.8
RHH5214_R3585
854.7
RHH5242_R3614
835.2
RHH5271_R3643
846.9
Naive CD8 T-cell nTPM: 734.4
Samples: 4
Max nTPM: 768.6
Min nTPM: 668.4
RHH5201_R3572
768.6
RHH5229_R3601
736.1
RHH5258_R3630
668.4
RHH5287_R3659
764.6
Non-Vd2 gdTCR nTPM: 530.2
Samples: 4
Max nTPM: 599.0
Min nTPM: 451.9
RHH5235_R3607
599.0
RHH5264_R3636
597.2
RHH5207_R3578
472.7
RHH5299_R3665
451.9
T-reg nTPM: 639.3
Samples: 4
Max nTPM: 756.1
Min nTPM: 556.5
RHH5301_R3667
585.7
RHH5237_R3609
556.5
RHH5266_R3638
658.9
RHH5209_R3580
756.1
Terminal effector memory CD4 T-cell nTPM: 620.1
Samples: 2
Max nTPM: 634.5
Min nTPM: 605.6
RHH5243_R3615
605.6
RHH5272_R3644
634.5
Terminal effector memory CD8 T-cell nTPM: 512.0
Samples: 4
Max nTPM: 567.6
Min nTPM: 441.5
RHH5232_R3604
518.8
RHH5204_R3575
441.5
RHH5261_R3633
519.9
RHH5296_R3662
567.6
Vd2 gdTCR nTPM: 557.0
Samples: 4
Max nTPM: 646.9
Min nTPM: 490.2
RHH5234_R3606
490.2
RHH5206_R3577
539.3
RHH5263_R3635
646.9
RHH5298_R3664
551.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
