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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
202.7
nTPM
GTEx:
202.7
nTPM
FANTOM5:
68.3
Scaled Tags Per Million
Pig:
237.8
nTPM
Mouse:
631.2
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
202.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 202.7
Samples: 105
Max nTPM: 577.2
Min nTPM: 37.7
Std nTPM: 104.4
Median nTPM:
218_1
71 years, female
577.2
352_1
62 years, male
549.1
354_1
81 years, female
450.0
163_1
78 years, male
396.6
319_1
81 years, male
381.6
237_1
82 years, male
374.2
355_1
70 years, female
372.7
356_1
87 years, female
369.9
394_1
75 years, female
349.3
386_1
76 years, male
347.4
350_1
84 years, female
346.1
379_1
60 years, male
339.6
243_1
75 years, male
338.4
375_1
74 years, female
330.4
353_1
82 years, female
318.1
172_1
72 years, female
309.4
292_1
71 years, male
299.9
351_1
91 years, male
297.1
321_1
62 years, female
295.8
293_1
68 years, female
292.3
286_1
68 years, female
286.6
376_1
75 years, female
281.0
503_1
68 years, male
276.0
335_1
73 years, female
272.9
349_1
83 years, male
268.6
229_1
69 years, female
268.0
377_1
82 years, female
266.1
384_1
83 years, male
260.0
318_1
68 years, male
258.2
447_1
81 years, male
255.7
291_1
76 years, male
253.5
452_1
88 years, female
246.3
177_1
74 years, male
237.2
173_1
67 years, male
235.8
295_1
61 years, female
234.2
480_1
63 years, male
230.5
517_1
88 years, male
228.8
316_1
62 years, male
228.4
251_1
78 years, male
225.0
389_1
86 years, female
223.8
406_1
79 years, male
220.5
404_1
82 years, female
220.1
425_1
59 years, female
214.8
246_1
77 years, male
210.8
347_1
72 years, male
208.8
264_1
73 years, female
207.3
526_1
61 years, male
203.8
506_1
65 years, male
202.3
265_1
87 years, male
198.8
348_1
84 years, male
197.1
266_1
85 years, male
192.6
320_1
89 years, female
189.4
217_1
76 years, male
189.1
189_1
76 years, male
187.2
468_1
89 years, male
186.2
322_1
76 years, male
183.8
115_1
83 years, male
182.3
6_1
73 years, female
177.5
396_1
62 years, male
169.8
99_1
64 years, male
166.9
35_1
74 years, female
162.2
405_1
91 years, male
160.2
126_1
63 years, male
155.7
518_1
75 years, female
155.4
307_1
66 years, female
153.7
313_1
79 years, female
150.4
153_1
70 years, female
149.8
324_1
76 years, male
149.1
499_1
55 years, female
145.4
254_1
77 years, female
144.6
42_1
85 years, male
143.0
137_1
83 years, male
142.8
317_1
60 years, male
142.7
9_1
66 years, female
139.1
4_1
88 years, female
138.2
311_1
78 years, male
138.0
288_1
66 years, female
134.2
120_1
70 years, female
124.0
315_1
62 years, female
118.8
17_1
71 years, male
116.5
41_1
94 years, female
115.9
117_1
61 years, male
115.2
109_1
81 years, female
114.5
2_1
77 years, female
110.8
415_1
77 years, female
109.8
43_1
64 years, female
106.8
308_1
70 years, female
104.2
81_1
67 years, male
104.0
145_1
84 years, male
100.9
18_1
88 years, male
100.2
314_1
67 years, male
98.5
142_1
61 years, female
96.0
414_1
84 years, female
94.3
32_1
67 years, male
91.3
162_1
79 years, female
87.7
466_1
57 years, female
81.0
495_1
57 years, female
74.1
89_1
63 years, male
70.4
119_1
70 years, female
63.3
490_1
67 years, female
62.1
139_1
64 years, female
59.8
149_1
88 years, male
58.6
413_1
59 years, female
44.5
491_1
89 years, female
42.7
501_1
88 years, male
37.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.